| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3000 |
|---|
| Symbol | |
|---|
| ID | 7089068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3542825 |
|---|
| End bp | 3543592 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643461885 |
|---|
| Product | flagellar motor protein PomA |
|---|
| Protein accession | YP_002358909 |
|---|
| Protein GI | 217974158 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1291] Flagellar motor component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0822538 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000000757228 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGGATTTAG CAACAGTAAT TGGAATTGTG GGTGCCTTTG GTTTTATCCT CGGGGCAATG
GCCACCAGCG GCGGTTTAAT GATTTTCGTT GATGTACCCT CGATTCTTAT TGTTTTCGGT
GGGTCCTTCT TCGTGGTGAT GATGAAGTTC ACTCTTAAAC AGTTTTTTGG CGCGGTAAAA
ATCGCCGCTA AAGCGTTTAT TTTTAAGATT GATAAGCCAG AAGATTTGAT TGAACAGTCC
GTGACTATGG CTGATGCCGC CCGTAAAGGC GGTTTTTTAG CCTTAGAAGA AGCGCAGATT
ACTAACAGCT TTATGCAAAA AGCCGTCGAC ATGCTTGTTG ATGGTCACGA TGGTGAAGTG
GTGCGCGCGG CCTTAGAGAA GGATATTGCG CTGACCGAAG AGCGCCATCG TACTGGGATC
GGCATTTTTA GAGCGTTTGG TGACGTCGGT CCGGCAATGG GCATGATAGG TACGCTGGTG
GGTCTTGTGG CCATGCTGTC AAACATGTCA GATCCTAAAT CCATCGGCCC CTCGATGGCG
GTGGCCTTGT TAACAACCTT ATATGGCGCT ATGGTCGCTA ACATGGTTTG TCTTCCTATC
GCGGATAAGT TAACGCTTAG GATGGGTGAA GAAATGCTGA ACCGTAACTT GATTATGGAT
GCGGTATTGG CGATTCAAGA CGGACAAAAC CCACGGGTGA TTGAAGGCTT CTTGAAAAAT
TATCTGGCTG AGAAAAATCG CAAAATAGAT ACAACGGACG GAGAGTAG
|
|---|
| Protein sequence | MDLATVIGIV GAFGFILGAM ATSGGLMIFV DVPSILIVFG GSFFVVMMKF TLKQFFGAVK
IAAKAFIFKI DKPEDLIEQS VTMADAARKG GFLALEEAQI TNSFMQKAVD MLVDGHDGEV
VRAALEKDIA LTEERHRTGI GIFRAFGDVG PAMGMIGTLV GLVAMLSNMS DPKSIGPSMA
VALLTTLYGA MVANMVCLPI ADKLTLRMGE EMLNRNLIMD AVLAIQDGQN PRVIEGFLKN
YLAEKNRKID TTDGE
|
|---|
| |