| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2289 |
|---|
| Symbol | |
|---|
| ID | 7087703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2716951 |
|---|
| End bp | 2719074 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643461187 |
|---|
| Product | transglutaminase domain protein |
|---|
| Protein accession | YP_002358211 |
|---|
| Protein GI | 217973460 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0224849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTAA CGGCCAGCAG CACGACACCG CAAATTGGCG ATAACATCAG CCGTCAGACT
TTATTTTGGT TATTGATCAC CAATATCGCC GTACTGAGCC CGCTATTTGA TAAGACCACG
CCTTGGACCT TAGGCATTTG CGCAATTTGT TTGCTGTGGC GTGTGGGGAT TTATGTCGGC
AAAGTGGCAA AGCCGCCGCG TTTTTTGGTG ACCAGTCTTG CGATCGGAGC CGCAACCACA
CTGGCACTCG TTTCAAAGGA AATAGGCTTA CTCAATGCGC TAGTGAATCT GCTGCTGTTA
GGTTATGCCT TAAAATACAT TGAAATGCGT AATCAAAGGG ATGTGCGCGT TGTCGTCCTC
GCGGGCTATT TTATTATCGC GCTGACCTTT ATCGACCATC AATCCCTGCT TAATACCGCG
AATTTACTCG TGGTAACGCT GATCAACACC TGCGTGCTCG TGACTCTGTA TCAAGATAAA
CACTCCCTAA AACACACGGC GTGGCTCGGT AGTAAATTTT TACTCCAGAG TGTGCCCCTC
GCGCTGCTGT TGTTTTTAGT GTTACCGCGT TTTGCGCCGC TCTGGTTAGT GCCCAACATG
AAAGAAGCGC AAACGGGCTT GTCTGATAGT CTGGCCATTG GTGATATCGG CAAGCTCACC
CGTTCAACCG AACTGGCCTT TAGGGCGAGT TTTACCAATG CAGCGCCCAT TAATGCTGAG
TTATATTGGC GCGCGCTGGT GATGGAAAAC TATGACGGTA TGACTTGGCG TCAGGAGGAA
GGCATTAAAA AGCTGCAAAA AGATGCACTG CTGTTTCCGC CCTCACGGCC AAGCCCCGCT
TCGATAAGTA GCGAGGGTCA AGATACTGCA AAACAAGACA AGCAAAAAAA CAAGCCGAGT
ATTCGTTACC AAGTGATTGC GGAGCCGAGC CACCAGCCGT GGTTATTTGG TCTCGATGTC
GCCTACAGCC AAGATGATAA TGTAGTCAAT ATGCCCGATT ATCGGCTGTT AGCGCTGCGC
AATGTCGATC AGCGAATGAG TTATCAAGTG GAGTCTTGGC CCAAGGCGAA GATGGATCTT
AGGCTCTCTG CGCGGCAAAG GCAGATTAAC CTCGAACTAC CAAGTAACAG TAATCCACGA
ACTTGGGCGC TGGCCGAGCA ATTCAAGACT CAGTATCCCG AGCCTAAGCC ACGATTGTGG
GCCATGATGC GCCACTTTAA TACCGAGCCT TTTTTCTACA CTCTCACGCC GCCTCCCCTT
GGGCCGCAGC AAGTGGATGA TTTTCTATTT GAAAACAAAG CCGGATTTTG TGTGCACTAT
GCCGCAGCCT TCATTGTTAT GGCGCGGGAC ACAGGCTTAC CCGCACGTAT GGTCACAGGC
TATCAGGGCG GAGAGTTTAA TCCGCAAGCG GGTTACTACA GCGTGTATCA ATATATGGCC
CACGCATGGG CTGAGGTTTG GCTCGAAGGT GAAGGCTGGG TACGTTTCGA CCCGACCGCT
ATGGTAGCCC CCGATCGAAT CGAACAAGGA TTCGACGCCC AGTTTGATCC TGCGCTGAGT
TACCTGCAGG AAAGCCCTTT TAGTAGCTTA CGCTTTAAAT CCATGCCTTG GCTCAATGAG
TTAAGGCAAC GTTTTGCCAG CATAGATTAT TACTGGAGCG TGTGGGTTCT GGGTTTCAAT
CAAGATAGAC AAAATCAAGT GCTCAGCGGC ATATTAGGTG ATGTGACAAA CACTAAAATC
GCGGTATTTA TGGGGCTATG TATCAGCCTT ATCGTGCTCT ATATCGCCTA CAGTGCGGGG
CTATTACATT TTAGCACTCA GGGCGATCCT ATCAGCGCTC GCTATCAACA GGTCTGCAAT
AGCCTCGCCC GCCATGGTAT TAAGCGTAAT GACAGTGATG GACCAAACCA ATTTGCGCAG
CAGATTATCG AGCAATACCA ACACAATGCA CCACAGCTTT GTGCGCTGAT GCATACCTTG
ACCCAAAGTT ATGTAGCGCT GAAGTATCAA GATTTGCCGA ATGATGACTA CCAAGCGCAT
TTAACAAAAT TTAAAGCGGC GGCGAAGCAA CTGAATTGGT TATTACTCAG GGCTAAGGTG
AAAAAGAAGT TCACGCTAGC CTAG
|
|---|
| Protein sequence | MTLTASSTTP QIGDNISRQT LFWLLITNIA VLSPLFDKTT PWTLGICAIC LLWRVGIYVG
KVAKPPRFLV TSLAIGAATT LALVSKEIGL LNALVNLLLL GYALKYIEMR NQRDVRVVVL
AGYFIIALTF IDHQSLLNTA NLLVVTLINT CVLVTLYQDK HSLKHTAWLG SKFLLQSVPL
ALLLFLVLPR FAPLWLVPNM KEAQTGLSDS LAIGDIGKLT RSTELAFRAS FTNAAPINAE
LYWRALVMEN YDGMTWRQEE GIKKLQKDAL LFPPSRPSPA SISSEGQDTA KQDKQKNKPS
IRYQVIAEPS HQPWLFGLDV AYSQDDNVVN MPDYRLLALR NVDQRMSYQV ESWPKAKMDL
RLSARQRQIN LELPSNSNPR TWALAEQFKT QYPEPKPRLW AMMRHFNTEP FFYTLTPPPL
GPQQVDDFLF ENKAGFCVHY AAAFIVMARD TGLPARMVTG YQGGEFNPQA GYYSVYQYMA
HAWAEVWLEG EGWVRFDPTA MVAPDRIEQG FDAQFDPALS YLQESPFSSL RFKSMPWLNE
LRQRFASIDY YWSVWVLGFN QDRQNQVLSG ILGDVTNTKI AVFMGLCISL IVLYIAYSAG
LLHFSTQGDP ISARYQQVCN SLARHGIKRN DSDGPNQFAQ QIIEQYQHNA PQLCALMHTL
TQSYVALKYQ DLPNDDYQAH LTKFKAAAKQ LNWLLLRAKV KKKFTLA
|
|---|
| |