Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2161 |
Symbol | |
ID | 7085967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2571254 |
End bp | 2574685 |
Gene Length | 3432 bp |
Protein Length | 1143 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643461062 |
Product | glycoside hydrolase family protein |
Protein accession | YP_002358086 |
Protein GI | 217973335 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000526501 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000457644 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATTGA GTAAATTGAT GCTTGCTATG ACGGGGATCA TAGTTCTTGG AGGATGTGGC GGCGATGGGG ATTCTGGTTC ATTACCTCCC AATATGGTTC CAGAGAACCA ACAATTACCG GATCCGACAA TCAAGCAGGA AATGTTAGAT TTTAATGATC TTGCAGTGCA TGATCCGTCA ATCATTAAAG CAGACGATAC CTATTACGTT TTTGGTTCAC ATTTAGCTGC GGCTAAATCA ACGGATCTGA TGAACTGGCA ATATTTGACT CGCATTGAGC CGGTACTTGA TGCCAATGGC GAACCGGTTC TCGATGATGA TAATAATCCT GTCACCATCA CACGCATTGC AAATGCACCC ACAGATCAAA ATCCATTATT TAATACAGTT TCGAGCGAAA TGGCGGCCGC TTTTAAATGG ACTGGCGATA AAGTTCAAGG CTCGTGGGCG CCGGATGTTA TCAAACTTAA AGATGGAAAG TATTATTTCT ATTACGATTT TTGTAACAAT CCAGATGACC CTGGCTATCC AACACCTGTG TGTAATGCCC CACGATCTTT TATCGGCGTT GCCGTAGCTG ACGCGATAGA AGGCCCATAT GTCGATAAAG GTGTATTTTT GCGATCAGGC TTAACGGCGG ATGAGATTAC TCAAGGTTTA GGACCTGATG GTGTAACCGC CTATAACGGT GGCACTATGC CCAACACCAT AGACCCCGCT GTTTTCTATG ACAAAAATGG ACAACTGTGG ATGACCTATG GATCTTACTT CGGTGGGATC TGGATCTTAA AAATAGATGA GGCCACAGCA AAACCATTCC CGAATCAAGG CTATGGCAAG CGGCTAACCG GTGGTGAGTT TGCGGCTAAT GAAGGCTCAT ATATTCTCTA TAGCCCCGAT GCTAACTATT ACTATTTATT TACTTCTATT GGTGGCTTTG CGGCCAATGG TGGTTATAAC ATTCGTGTTT CCCGCTCAGA AAATCCTGAC GGACCTTATG TCGATGCCAG TGGTTATGAC ATGACTCAAG TTTATAAAAA TCCTGAAGAA CATGGCAATA AGATACTCGG TGGCTTCGAA TTTGTTGCAG AGAAAGGCGA TACGGGAAGC ACTCAGGGTT ATTTATCACC AGGCCATAAC TCAGCCTATT TTGATAAAAA TACAGGTAAA TATTTCCTCG TTATCCATAC TCGTTTCCCT AACCGCGATG AGCAACACTC TGTACGTGTT CATGAGATGT TTATCAATGC CGATGGTTGG TTAGTGGTAT CACCACATCG TTATGCGCCA ATTGACGGTG ATAATGTTGT CGATGCACTC GATCTCGTCG GTGACTATCG CTTTATTAAT TTTGAAAAAG ATACCAACAC TTCACCAAAA ACATCCGTTT ACCTCACACT GACCGAGAGT CGTCTTGTGA AAGGGGAAGT CACGGGTAAA TATCGTTTAT ACGATAACGA ACCGAACAGA ATCACGTTAA CCCTTGATAA TTTAGGTACA TTCGAAGGTA CTCTCGCATG GCAGTGGGAT GAGACCCTCG CTAAATTGGT ACCCACCTTC AGCGCATTGT CGAATGAAGG CGTCTCCGTT TGGGGCTCAA AACTGCTCGA TAAGACCTCA GAACAACTAT TAACCGACAT AGGCAACAGT ATAGATGTTA TCAGTGAAGC GACGGGTGGT GTGATTGCGC TACCAACGCG CGGTACACGC GGTGCGACAA TTGAGTGGAC ATCAAGTGAT GCTACTGTGA TCCACCCCGA TGGCACTGTG GTTCGCCCCA ATGTAGGGGA AGGTGACAAG GTAGTAACTT TGACCGCCAC TATCATGGTT AACGGTAAAA AAGTCACTAA GACGTATCAA GTGACTGTGT TTGCGAGAAA AACCTATAAC CGTATCGCGC AGTACAGTTT CGAGAACAAC CTGACAGACT CTTTAGGGCT GTTTGCAGCT GGTCAACCTA CGGGTGATAG AATATTTAAA GCAGCTGATT CAGTTAGTTA TAGCATGGGA CTTGAAGGGG AAGCACTGGC ACTCGATGGC GCCCACGGCG TGTTACTGCC TACAGGGATC ATTTCAAGCT ATGAGTACAC TGTCTCATTC TGGGCCAATC CGACAGTCAT CACTGGGTTT TCAACGGCAT TTTTTGGTGC AGTCAATGAG GAAACCGCAG CCGATGGCGG TAAGTTCTCT AACACTTGGA TCAGCATGCT GCCCCAAGGC TGGGATGGCA ATACCATGTT TTGGAGTAAC GGCAGTGCCT GGTTTGATGG CGTTACCGGT GAGCGCATAC CTGAAAATAC TTGGTCACAT GTCGCGTTTT CGGTGAGCAA TGGGCTGGTA CGTGTCTTTA TCAACGGTGT TGAAAAATTC AGTCGCGGCA ATCTCAGCGA TTATTTCAGC GGCCAACAGG GCGTCTTTGG GCTTGGGGTT AACTACTGGG ATCTGCCCTA TAATGGTTTG ATTGATGAAC TTAAGGTATA TGAAGCGGCA TTGACTGCAG GTGAAGTCAA AGCTTTGGAT ATTGATAAAT TGCCAGACAG CGAATTACTA GCATCTGCAG TGGATATCCT CGACTTAGGC GATTTATCCT CAGTACGTGA AAATTTGCAT TTGCCTGTCA CGGGTCCTTA TGCAGCAGCA ATAACTTGGG TATCTTCAGA TCCGACTATC ATAGATACCA CAGGTGGCGT GACTCAGCCA GGTCGTGAGG ACACTGATAA AGTGGTGACC TTGACGGCAA CCATAAAGCT GGGACAAGCC ACTCAAACCA AAGTGTTCAT AGCAAATGTG AAGTCAATGG CGCCACCAAC ACCTTTAGCT GTCTATAGCT TTGAAGATAA CCTAACGGAC AGCACTGCTC ACTTTGGTGC TGGCACTGTG GTGGGTAACT TAATTGGTAC AACTGGTGGA ACCATTACTT ACACTGATGG CGCTGTGGGC AAAGCGGCAG TATTTGACGG AAAATCGGGT ATTGAACTGC CAAACAACCT GATCAAAGAC AATAGCTATT CAGTCTCTTT GTGGCTGAAT CCTAAAGTCT TGAACAAATA CACCAGTGCG CTCTTTAGTT ATGCCAGTGC TTCAAGCTGG ACCAGCGTAT TACCTGGCGG ACAAAACGAC TATGAACATG CGGTATTATG GTCTGGTGAA GCTTGGTATG ACGGTAGAAC TGGCTTTACT ATGCCAAAAG AGACTTGGTC ACACATGGTG TACACGGTTA ATGGTGGGGA TTTGAAGGTC TACATCAATG GTAATTTACT GTTTACTGGC GCCAACTTCC CGAACGTTTT CTCTGTACCC ACCACAAAAT TTGCGGTCGG CGTTAACTTC TGGGATACAC CTTTCACCGG TTCTATCGAT GAAATCAAGT TCTATGACGA AGCGATATCC GAGCAAGACG TGCAAGATCT GTTTGGCGAA TCCAATCAAT AG
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Protein sequence | MKLSKLMLAM TGIIVLGGCG GDGDSGSLPP NMVPENQQLP DPTIKQEMLD FNDLAVHDPS IIKADDTYYV FGSHLAAAKS TDLMNWQYLT RIEPVLDANG EPVLDDDNNP VTITRIANAP TDQNPLFNTV SSEMAAAFKW TGDKVQGSWA PDVIKLKDGK YYFYYDFCNN PDDPGYPTPV CNAPRSFIGV AVADAIEGPY VDKGVFLRSG LTADEITQGL GPDGVTAYNG GTMPNTIDPA VFYDKNGQLW MTYGSYFGGI WILKIDEATA KPFPNQGYGK RLTGGEFAAN EGSYILYSPD ANYYYLFTSI GGFAANGGYN IRVSRSENPD GPYVDASGYD MTQVYKNPEE HGNKILGGFE FVAEKGDTGS TQGYLSPGHN SAYFDKNTGK YFLVIHTRFP NRDEQHSVRV HEMFINADGW LVVSPHRYAP IDGDNVVDAL DLVGDYRFIN FEKDTNTSPK TSVYLTLTES RLVKGEVTGK YRLYDNEPNR ITLTLDNLGT FEGTLAWQWD ETLAKLVPTF SALSNEGVSV WGSKLLDKTS EQLLTDIGNS IDVISEATGG VIALPTRGTR GATIEWTSSD ATVIHPDGTV VRPNVGEGDK VVTLTATIMV NGKKVTKTYQ VTVFARKTYN RIAQYSFENN LTDSLGLFAA GQPTGDRIFK AADSVSYSMG LEGEALALDG AHGVLLPTGI ISSYEYTVSF WANPTVITGF STAFFGAVNE ETAADGGKFS NTWISMLPQG WDGNTMFWSN GSAWFDGVTG ERIPENTWSH VAFSVSNGLV RVFINGVEKF SRGNLSDYFS GQQGVFGLGV NYWDLPYNGL IDELKVYEAA LTAGEVKALD IDKLPDSELL ASAVDILDLG DLSSVRENLH LPVTGPYAAA ITWVSSDPTI IDTTGGVTQP GREDTDKVVT LTATIKLGQA TQTKVFIANV KSMAPPTPLA VYSFEDNLTD STAHFGAGTV VGNLIGTTGG TITYTDGAVG KAAVFDGKSG IELPNNLIKD NSYSVSLWLN PKVLNKYTSA LFSYASASSW TSVLPGGQND YEHAVLWSGE AWYDGRTGFT MPKETWSHMV YTVNGGDLKV YINGNLLFTG ANFPNVFSVP TTKFAVGVNF WDTPFTGSID EIKFYDEAIS EQDVQDLFGE SNQ
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