| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1938 |
|---|
| Symbol | |
|---|
| ID | 7090105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2292509 |
|---|
| End bp | 2293798 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643460842 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_002357866 |
|---|
| Protein GI | 217973115 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCAG AGCGTTGCGC CTCCTACTAC AATGCCACCA TAAACCAAGA GTCGAATTAT
CCTCAGTTAG AAGGAGACAT TCGCGTCGAT GTGGCGATTG TCGGTGGCGG GTTTACCGGT
GTAGCAACGG CGCTGGAATT ATCCGAGAAG GGCTACAAGG TGGCGCTTAT TGAGGCCAAC
AAAGTTGCGT GGGGCGCGAC CGGACGCAAC GGCGGGCAGG TGACTGGCAG TTTGTCTGGC
GATGCGGCGA TGACAAGACA GCTGCGTCGT CAGATTGGCA ATGAAGCTGA AGATTATGTG
TGGAATTTAC GTTGGCGCGG CCATGACATT ATTAAAAATC GGGTGGCCAA GTACGGCATA
GACTGTGATT TAAAATTTGG TCATATCCAA ACCGCTTACC AGCCAAATCA CATGCACGAG
CTTAAGGCTA TGCATGATGA AGCGCAGCGT CGCGGCATGG GGGAATTTAT GACGCTGGTA
TCAGCCGATG AAATGCCCGC CTATTTAGGC TCGCCCTTGT ATCACGGCGG CTTAGTTAAT
CGGCGCAACA TGCATTTACA CTCAGTCAAT TTATGCCTGG GTGAGGCCCG CGCCGCAGCA
GGTCTTGGGG CGTTGATCTT TGAAAATTCG CCCGTGCTCG ATATTGAGGA GGGCGATGTC
GCCACCGTTG TCACCGCCAA GGGAAAAGTT CGCGCCAATA GCTTGCTGAT CGCGGGGAAT
GCCTACCATA AACTTGCGCG CCCTCAACTG CGTGGCATGT TATTTCCTGC GTCCTTAGGC
AATTGTGCTA CTGCAATTTT GCCTGATGAG ATCGCTTCGC AAATCAATCC GCAGGATTTA
GCCGTGTACG ATTGTCGCTT TGTGCTCGAT TACTATCGCC TGACTGCAGA TAAACGGTTG
ATGTTCGGCG GCGGCACTAA TTACAGCGGC CGCGATCCTA AAAATGTGGC GGCGGAATTA
CGGCCTGCAA TTGAGCGCAC GTTTCCGCAA TTAAAGGGTG TTGATATCGA ATTTGCGTGG
GCGGGAATGG CGGGGATTGT GATTAACCGT ATCCCGCAGC TCGGCAAAGT ATCGCCTAAT
GTATTCTATT GCCAAGGATA TTCTGGGCAT GGGGTGGCGA CGTCACACAT TATGGCTGAG
ATCATGGCCA ATGCGATGGA CGGACAATTG CGTGAATTTG ATTTGTTTGC CGGCATGCGC
CATATCCGTA TTCCGTTAAA TGAATGGTTC GGCAATCAAG CGCTGGCGTT AGGCATGTTG
TATTACACTT TACGGGAAAA CTGGCGCTAG
|
|---|
| Protein sequence | MPAERCASYY NATINQESNY PQLEGDIRVD VAIVGGGFTG VATALELSEK GYKVALIEAN
KVAWGATGRN GGQVTGSLSG DAAMTRQLRR QIGNEAEDYV WNLRWRGHDI IKNRVAKYGI
DCDLKFGHIQ TAYQPNHMHE LKAMHDEAQR RGMGEFMTLV SADEMPAYLG SPLYHGGLVN
RRNMHLHSVN LCLGEARAAA GLGALIFENS PVLDIEEGDV ATVVTAKGKV RANSLLIAGN
AYHKLARPQL RGMLFPASLG NCATAILPDE IASQINPQDL AVYDCRFVLD YYRLTADKRL
MFGGGTNYSG RDPKNVAAEL RPAIERTFPQ LKGVDIEFAW AGMAGIVINR IPQLGKVSPN
VFYCQGYSGH GVATSHIMAE IMANAMDGQL REFDLFAGMR HIRIPLNEWF GNQALALGML
YYTLRENWR
|
|---|
| |