Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1807 |
Symbol | |
ID | 7088422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2131406 |
End bp | 2132242 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643460711 |
Product | integrase family protein |
Protein accession | YP_002357735 |
Protein GI | 217972984 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.73649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000891918 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATGTGC AAAAAACAAG CAATACAGCA CCTCATTTAC ATAGCTCAAT TTCACAGGCG ATTGATTATT ACATCCGCCA TGCAGCGCAA TACCAAAAGG CCTTTGTTAA TTCTGAGCAG TACCGATATA AGCGCTTAAA AACGGAGTTG GGTTCATATC GCTTGATAGA CCTAACGCCA GAGCTTATCA GGAGCTTCAT AGACAAGCGA TTGACCAAAG TTAAACCATC ATCAGCAAAG CGTGACGTTT GTGCCTTACA GCGCTGCTGG AACTGGTACA GACGTGATTT AGGCATGCGA TTAGATGATC ATTTCAAGCA TGTACGCCTA CCTGTAGATA ACACGGTAAG AGAGTTTATC CCTACTGATT TTCAACTAAA GCAAATCATT GATTTATTAC CGCTCCATGT AAAACCCATC ATTGAACTAC TTGCTGAAAC TGCCTGTAGA CGCAGTGAAA TACTCAAACT GACGGTTCAA GATGTAAACC TTCATCAACG AACCATCTAT TTACGTAATA CTAAGAATGG CTTAGATAGG GTTGTGCCAC TGAGTAAAAA AGCCTGTGTG ATCTTAAATG AAGCGATTAA TCGAGCCAAA AACAAGCTAT TCGATATTGA AGCTGATCAT GTAACCAGAC AGTTTAGAAT CTCTGCTGAT AAAGCGGGAT GCCCTTTATG CGTGGTTCAC AGCCTAAGGC ATTACAAGCT GAGCAAGTTG ATCTCTCAGG GAATAGATCA TGTTATTGTG GCTAAAATTT CAGGTCATCA GGACATTAGA ATGTTGCAGC GTTATGTAAA GTTAGATGCT AGTGGACTTG CTCACTTAAT GGATTAG
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Protein sequence | MNVQKTSNTA PHLHSSISQA IDYYIRHAAQ YQKAFVNSEQ YRYKRLKTEL GSYRLIDLTP ELIRSFIDKR LTKVKPSSAK RDVCALQRCW NWYRRDLGMR LDDHFKHVRL PVDNTVREFI PTDFQLKQII DLLPLHVKPI IELLAETACR RSEILKLTVQ DVNLHQRTIY LRNTKNGLDR VVPLSKKACV ILNEAINRAK NKLFDIEADH VTRQFRISAD KAGCPLCVVH SLRHYKLSKL ISQGIDHVIV AKISGHQDIR MLQRYVKLDA SGLAHLMD
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