| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1601 |
|---|
| Symbol | |
|---|
| ID | 7090002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1871404 |
|---|
| End bp | 1872045 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643460502 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002357529 |
|---|
| Protein GI | 217972778 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0132494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000697535 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAG GAATATTCAC TGTTGTAGCA TTAACATCAT CGCTTGCTGC TGTAAGTAAT
CTTACTTCCT TAGATAGCAT AGATACCTTC TCAGCAGTAC CTAATGTACG TTTTAAACAA
TCTGAAATTG CTGCCGTTCC AAATGTTCGC TTCAAACAAA CTGAAGTTGC AGCCGTTCCA
AATGTTCGCT TCAAGCATAT TGAAGTTACT GCCGTGCCAA ACGTTCGCTT CAAGCATATT
GAAGTTGCAG CCGTACCAAA TGTTCGCTTT AAACAATCTG AAATTGCTGC CGTTCCAAAT
GTTCGCTTCA AACAAACTGA AGTTGCAGCC GTTCCAAATG TTCGCTTCAA GCATATTGAA
GTTACTGCCG TGCCAAACGT TCGCTTCAAG CATATTGAAG TTGCTGCCGT ACCAAATGTT
CGCTTCAAAC AATCTGAAGT TGCTGCCGTT CCAAATATTC GCTTCAAACA AACTGAAGTT
GCAGCCGTTC CAAATGTTCG CTTCAAGGAT ATTGAAGTTG CTGCCGTACC AAACATTCGC
TTCAAGCATA TTGAAGTTGC TGCCGTTCCA AATGTTCGCT TCAAGCATAT TGAAGTTGCT
GCCGTACCAA ATGTTCGTTT TACCGAAACA ACTTTTGCTT AA
|
|---|
| Protein sequence | MIKGIFTVVA LTSSLAAVSN LTSLDSIDTF SAVPNVRFKQ SEIAAVPNVR FKQTEVAAVP
NVRFKHIEVT AVPNVRFKHI EVAAVPNVRF KQSEIAAVPN VRFKQTEVAA VPNVRFKHIE
VTAVPNVRFK HIEVAAVPNV RFKQSEVAAV PNIRFKQTEV AAVPNVRFKD IEVAAVPNIR
FKHIEVAAVP NVRFKHIEVA AVPNVRFTET TFA
|
|---|
| |