Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1177 |
Symbol | |
ID | 7087949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1387371 |
End bp | 1388864 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643460086 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_002357113 |
Protein GI | 217972362 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.651177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAAA TCGGGTTAGT TGTTGCTTCT CTCATTTTAT TGATATTTTC ATTATATATA CTGCAGGCAA AATATAGATC GCAACGGTCA CAGCAAAAAT TCTTAGTACA GCTTTGTCTC CAGCTAGAGC AACAAAAGAT TGAACGCCAA GCATTAGACC TTAGCATCGT TCCCCAAGAG TTTGCGCCTC TCTACCATAC CTTAGATGAA TTATTAAAGG CCTTACCCGC AAGCGCAGGT AAAGACAAGT TGACTGGACT GGTAAACCGG GTCGGCCTGA AACGTACGCT GACCTCCATG ATGCCGCTGA CTCAAGGGAC ATTAGTGCTG ATTGATATTT ATCGATTTCG CTATGTGAAT GATCTCTTTG GGTTTGTGTT TGGCGATATC CTGCTAAAGC AATTTGCGGA ACGGTTAAAC ACCTTAAGTT TATCCCCAAG ATTAATCGCA CGGCTCAATG GTGATGAATT TTGCCTATAT TACGAGCAAG CGTTGACTGA GGAGCAATTG GTCCATTTAA GAGGCCGTTT GCAGGTGCCT TTTAGTATTA AGAACACGCC AGTCAGCGTT AAACTTCAAA TCGGCTGTGT GCATTTACAA GAACACCATG CCGATACGAG CCAGATGTTA CGTCGAGTCG ATTTGGCGCT GAAGAAAGCC CGTCACTCTC GTAGCGCGAT TGCTTACTAT GCCGAGAATG ATGATATTCA ACAGTTAAGA GAACTGAGAA TTATCGATAG CTTGCCTAAA GGTTTGCAAC GCAATCAAGT GTATATGGTG TATCAAGCGA AACAGGATAT TGCGACGGGA CGGTGTTTTC AGGTTGAAGC CTTGATGCGC TGGGAACACG ACGAACTTGG GGTTATTTCT CCGGGTGAGT TTATTCCCTT AGCCGAATAT GCAGGCATGA TTGATTTAGT GAGCCAATGG GCACTCGATC AGGTTTTAGC GCAGCAGGCA AAATGGCGCG CGGCAGGAAT ACAATTGTGC GTCGCAGTCA ATCTCTCTAC ACGGGATCTT GACAGTGAAA CCTTGCCCCA AGAAATTGCG GCGAGATTAG CGCATTACAA ACTTCCGCCA GAATCCTTAA TGATTGAAAT TACTGAAAGT ACCTTAATGG CGGATTTAAC TAAGGCGGTC GAAACCTTAG ATAAAATTCG TGCGTTAGGG GTGAGGCTCG CAATTGATGA TTTTGGTACC GGTCATTCTT CACTGGCTTA CTTGAAGCAT CTACCCGTCA ATGAAGTCAA AATCGATAAA GCTTTTTTAA AGGATCTTGA GCAGGATAAA CCGTCGGAAT ATATCCTCGA AGCCAGTATT AATATTGCTA AAAAACTCGG TTATGAGGTG ACTGTCGAAG GGATTGAAAC CCCTGAAATT AGAGATATAC TCGTCGCTAT GGGCGTCGAT ACCCTACAAG GCATGTATTA TGCTAAGCCC ATGAGAGCAG CAGAACTGGA AATGAACTGG GCCCGGCTGC ATAACGCCAT GTAA
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Protein sequence | MFEIGLVVAS LILLIFSLYI LQAKYRSQRS QQKFLVQLCL QLEQQKIERQ ALDLSIVPQE FAPLYHTLDE LLKALPASAG KDKLTGLVNR VGLKRTLTSM MPLTQGTLVL IDIYRFRYVN DLFGFVFGDI LLKQFAERLN TLSLSPRLIA RLNGDEFCLY YEQALTEEQL VHLRGRLQVP FSIKNTPVSV KLQIGCVHLQ EHHADTSQML RRVDLALKKA RHSRSAIAYY AENDDIQQLR ELRIIDSLPK GLQRNQVYMV YQAKQDIATG RCFQVEALMR WEHDELGVIS PGEFIPLAEY AGMIDLVSQW ALDQVLAQQA KWRAAGIQLC VAVNLSTRDL DSETLPQEIA ARLAHYKLPP ESLMIEITES TLMADLTKAV ETLDKIRALG VRLAIDDFGT GHSSLAYLKH LPVNEVKIDK AFLKDLEQDK PSEYILEASI NIAKKLGYEV TVEGIETPEI RDILVAMGVD TLQGMYYAKP MRAAELEMNW ARLHNAM
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