Gene Sbal223_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1144 
Symbol 
ID7087597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1346021 
End bp1347091 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content46% 
IMG OID643460055 
Productmembrane protein 
Protein accessionYP_002357082 
Protein GI217972331 
COG category[R] General function prediction only 
COG ID[COG3726] Uncharacterized membrane protein affecting hemolysin expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000054615 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTAGGC AAGCGCTCTA CATTTTAAGG GTCAAAGTGT TATATCTTAA AGGGCTAAAG 
AAAAGCCATA AAATCAGTAG ACTGATCCAA ATTGCCGCCG CCTTCGCCTT GATATTCGGC
TTAGTACAAT TGTGGCAGAC AAGCCTACTA CAAGGTCAGC TGCTTCTAAA GTCCCAAACT
CAAAAGATGG CCAGATTACT GGTACAGCAA ACCGCTTATG GAGCAGCGCC CGCGCTACAA
CTGCAAAATG ATGAGCAGTT GCAATGGCTC GCCAGTGCTT TAGTGGAAGA TCCTAAGGTG
ATGTCTGCGG CTATCTTCAG CGACCAAGGC ATGCGGTTAT CTTTCGCCCA AAGTATCACT
AAGGATGTTG TAGATCCTGA CTCGGAAGAA ATGAATTTGC TACTAAGCAA ATATCCTCCC
TATGTTGAGC CTGTGATCCA AGAAGGGAAA AATCTAGGTT ATGTCGAAGT CAGGCTCGAT
ACCAAGCTGT TTTTCAACGA AATCAAAGAA GCCCACAACT TAAACATGGA ACAACAACAA
ATCATGCTGC TGGTTGCAGG CTTGATTGGT ATGTTGCTTT CGCGCTCTTT GTCTTTCAAA
CGCGCCGATT TTGACCGCCG CCGCTTTCGG GTTAAATTGC GTCAATCGCC GAAAAAGTCG
AAGAAAGAAT CCTCAGCTGA AGAGCCATCT GAAAGTGCGA GTGATAGATC AGCGCAAGTG
CTAACCGAAG ATCAACCGGT GTCGACCACT GATCACCCAC AAGAGAAAGC GGCTAAATCC
ACTAAGGCGC CAAAAGCAGT AACAGAGACC AGTGTCGATA AGCTCACTCA GACCAGCGTG
CAAACTAAGG CCGAAAAAAC GTCAGAAAAA TTATTAGAGT TACAGGATAA TACTGCAGTT
GAAAACGCGA CAAACGATGC GGAACAAGCG GCACCTGTAA AGGTTAAACC TAAGGTTAAA
AGTGTCCGTC AGGTAAAACA CGCGACTAAA GCAACAGCCG TTACGGCCGA AACCTCGACG
CCAAAAACAC CCAGCGAGCC AAGCGATCTC GACACAGATT TAACAGGTTA A
 
Protein sequence
MIRQALYILR VKVLYLKGLK KSHKISRLIQ IAAAFALIFG LVQLWQTSLL QGQLLLKSQT 
QKMARLLVQQ TAYGAAPALQ LQNDEQLQWL ASALVEDPKV MSAAIFSDQG MRLSFAQSIT
KDVVDPDSEE MNLLLSKYPP YVEPVIQEGK NLGYVEVRLD TKLFFNEIKE AHNLNMEQQQ
IMLLVAGLIG MLLSRSLSFK RADFDRRRFR VKLRQSPKKS KKESSAEEPS ESASDRSAQV
LTEDQPVSTT DHPQEKAAKS TKAPKAVTET SVDKLTQTSV QTKAEKTSEK LLELQDNTAV
ENATNDAEQA APVKVKPKVK SVRQVKHATK ATAVTAETST PKTPSEPSDL DTDLTG