| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1081 |
|---|
| Symbol | |
|---|
| ID | 7087854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1276898 |
|---|
| End bp | 1278184 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643459992 |
|---|
| Product | protein of unknown function DUF1624 |
|---|
| Protein accession | YP_002357019 |
|---|
| Protein GI | 217972268 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3503] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000147779 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCTA ACATTAGTAG TTCTAATAAC AGCTCTAACA TCAGTTCGAA CATAAACACT
CGTCCTGAGT TACCGTCAGG TTTTGCCGAG CAAGAACTGA GTCGTTCTAT TGGCCGTAGC
CGTATCAATA GTATCGATAT GATGCGCGGC CTGGTGATGC TTATCATGCT GCTCGACCAT
GTGCGGGAAA GGTTTTTCCT GCATATGCAG GTGAGCGACC CCATGGATTT GAGTTCGACC
TCTTGGGGAC TTTTTCTAAG CCGCTTTGCC GCGCATTTTT GTGCGCCAGT GTTTGTGTTT
CTAACGGGCA TTTCTGCTTG GCTTTATGCC AATCGCAGTC ATGGACAGCC GCGTTCAGCG
CGGGCGTTTT TGATTAAACG TGGCTTATTT TTAATCGCGC TCGAAATCTT AGTGATCAAC
ATCTCTTGGA TGGGCAACTA CCATACGCTT TGGTTGCAGG TCATTTGGGT GATCGGCCTG
AGCATGTTAA CGCTGGCGGC ACTGATAAAT CTGCCTAGAC CTTGGATGGC TGTTTTAGGT
TTCGCGATTG TCTTTGGTCA TAATCTGTTG ACGCCAATTC ATTTTCAGCC GAGTGAATGG
GCTTACGGTT TGTGGACCAT ATTGCACGAC CGTGGATATC TGATTAGCGA AGGTGCATTA
AAGATCAAAG TGAGTTATCC CGCGCTGCCT TGGATGGGCG TGATTTTACT GGGGTATGTC
GCTGGGCCCA TTTTCAGTCA GAAACCGAAT GCTAACTCGC TTGAAGCCTC GCAGCGCCAG
CAAACACTGC TGAGATTAGG GATAAGCTGT TGGGTACTTT TTGCATTGCT ACGCGGGTTT
AACATCTATG GCGAAACCTT GCCTTGGCAG GCGGGGGTGC ATTTGGGTGA AACCTTGATG
TCGGTATTTA ATTTAACCAA ATACCCGCCA TCATTAAGTT TTTTACTGGT GACCTTAGGC
GGCATGTTCT TTTGCTTAGT GGCCTTTGAG CGGTATTTTG CATCAAGTGG GAAAGTAGAG
GGGAGATTAG CGCGAGTCGG CCATGGGTTG TCTGTGTTTG GCTCAGTCCC TATGTTCTTC
TATATCCTAC ATTTGTACGT GTTGTTACTG CTTTATAGCT TAGCAAAATT CACCTTTGGC
GCTAACCACG GTGAGTACTT TGGGGTGAAT AGTATGGGAT GGATTTGGTG CATCGCGGGC
GTGTTAGCTA TCGCGCTGTA TTATCCCGTT AAGCGGTTTA GCGAGTATAA AAAACACAGC
ACTCAGGCTT GGATTAAGTA CCTCTAA
|
|---|
| Protein sequence | MSSNISSSNN SSNISSNINT RPELPSGFAE QELSRSIGRS RINSIDMMRG LVMLIMLLDH
VRERFFLHMQ VSDPMDLSST SWGLFLSRFA AHFCAPVFVF LTGISAWLYA NRSHGQPRSA
RAFLIKRGLF LIALEILVIN ISWMGNYHTL WLQVIWVIGL SMLTLAALIN LPRPWMAVLG
FAIVFGHNLL TPIHFQPSEW AYGLWTILHD RGYLISEGAL KIKVSYPALP WMGVILLGYV
AGPIFSQKPN ANSLEASQRQ QTLLRLGISC WVLFALLRGF NIYGETLPWQ AGVHLGETLM
SVFNLTKYPP SLSFLLVTLG GMFFCLVAFE RYFASSGKVE GRLARVGHGL SVFGSVPMFF
YILHLYVLLL LYSLAKFTFG ANHGEYFGVN SMGWIWCIAG VLAIALYYPV KRFSEYKKHS
TQAWIKYL
|
|---|
| |