| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0517 |
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| Symbol | |
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| ID | 7088431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 587964 |
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| End bp | 588452 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643459444 |
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| Product | MSHA pilin protein MshC |
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| Protein accession | YP_002356474 |
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| Protein GI | 217971723 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.426127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTAACT TCTCTATGTC AAAACAGGCC GGATTTACCT TAGTAGAATT AGTGACGACC
ATCATCTTGA TTTCAATTCT TGCTGTGGTT GTACTGCCTC GCCTGTTTAC TCAGTCTTCT
TACAGTGCTT ATAGCCTACG TAACGAGTTC ATTAGCGAGC TGCGTCAAGT ACAGCAGAAA
GCGCTCAATA ATACTGACAG GTGTTTTCGT GTAACTGTTT CTGGCACTGG TTATCAAGTG
AGTCAATTCC CAGCCCGAAA TGGGGCAGCT TGTTCTGGTA CTGCATTATC GCCAAACCCG
CTTTATACCC AAGCTTTTCA AGGTAGTGCT CAATTAGTGC TAGTAAGCAC TAACAGCAGC
AACTTCAGCC TCGATTTCAA TATCAATGGT AGACCTTCGT TGGCTTGTAA TGGGCCATGC
ATTAATGTGA TTGCTAATGA CACTGTGATG ATTAATGTCT CCAGCGAGGG TTATATTTAT
GCGAATTAA
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| Protein sequence | MLNFSMSKQA GFTLVELVTT IILISILAVV VLPRLFTQSS YSAYSLRNEF ISELRQVQQK
ALNNTDRCFR VTVSGTGYQV SQFPARNGAA CSGTALSPNP LYTQAFQGSA QLVLVSTNSS
NFSLDFNING RPSLACNGPC INVIANDTVM INVSSEGYIY AN
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