Gene Tmz1t_4078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_4078 
Symbol 
ID7873305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp4477208 
End bp4478113 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content74% 
IMG OID643701009 
ProductROK family protein 
Protein accessionYP_002891032 
Protein GI237654718 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGACCC GCATCGGCAT CGACCTCGGC GGCACCAAGA TCGAGCTCGT GGTGCTCGAC 
GCCGACGGTC GCGAGCGCTG GCGCCGCCGG GTGCCGACCC CGCAGGGCGA CTACGGCGGC
ACGCTGCGAG CCATCGCCGC GCTGGTCGAG GAGGCCGAGC GCCTCACCGG CGCGGGCGCC
CGCATCGGCG TCGGCACACC GGGGTCGCCT TCGCCGCGCG ACGGCCGCAT CCGCAACGCC
AACTCCACCT GCCTGAACGG CCAGCCGCTG CAGCAGGACC TCGAAGCCCT GCTGCGCCGA
CCGCTCCGCC TCGCCAACGA TGCCAACTGC CTGGCCATGT CGGAGGCCGC CGACGGCGCC
GGCGCGGGTG CACGTACCGT GTTCGCAGCC ATACTCGGCA CCGGGGTGGG CGGCGGCATC
GTCGTCGACC AGAAACTGCT GGTGGGCGCC AACGCGGTGG CCGGCGAATG GGGCCACAAC
CCGCTGCCGC TGCCCGCGCC CGACGACCTC CCCCTGCCCG CCTGCTATTG CGGACGCGCC
GGCTGTATCG AGACCTACCT GTCCGGTCCC GGCCTGGCCG CCGATCATCT GCGCCATGGG
GGCGAGCCCC TCGACGCTGC AGCCATCGCC CGCCAGGCCA TCGAGGGCCA GCGCGCCTCT
CAGGCCAGTC TCGAACGCTA CGAGCTGCGG CTCGCGCGCG CACTCGCGGG CGTGATCAAC
CTGCTCGACC CCGAGGTCAT CGTGCTCGGC GGCGGCCTGT CGCAGATCGC GCGCCTGTAC
GAGCACGTAC CGCGGCGGTG GGCTGCGCAC GTGTTTTCCG ACACCGTGTC CACGCGCCTG
CTGCCGGCAC GGCACGGCGA CGCCTCGGGC GTACGCGGGG CGGCCTGGCT GTGGCCGTCG
AACTGA
 
Protein sequence
MGTRIGIDLG GTKIELVVLD ADGRERWRRR VPTPQGDYGG TLRAIAALVE EAERLTGAGA 
RIGVGTPGSP SPRDGRIRNA NSTCLNGQPL QQDLEALLRR PLRLANDANC LAMSEAADGA
GAGARTVFAA ILGTGVGGGI VVDQKLLVGA NAVAGEWGHN PLPLPAPDDL PLPACYCGRA
GCIETYLSGP GLAADHLRHG GEPLDAAAIA RQAIEGQRAS QASLERYELR LARALAGVIN
LLDPEVIVLG GGLSQIARLY EHVPRRWAAH VFSDTVSTRL LPARHGDASG VRGAAWLWPS
N