Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_4078 |
Symbol | |
ID | 7873305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 4477208 |
End bp | 4478113 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643701009 |
Product | ROK family protein |
Protein accession | YP_002891032 |
Protein GI | 237654718 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGACCC GCATCGGCAT CGACCTCGGC GGCACCAAGA TCGAGCTCGT GGTGCTCGAC GCCGACGGTC GCGAGCGCTG GCGCCGCCGG GTGCCGACCC CGCAGGGCGA CTACGGCGGC ACGCTGCGAG CCATCGCCGC GCTGGTCGAG GAGGCCGAGC GCCTCACCGG CGCGGGCGCC CGCATCGGCG TCGGCACACC GGGGTCGCCT TCGCCGCGCG ACGGCCGCAT CCGCAACGCC AACTCCACCT GCCTGAACGG CCAGCCGCTG CAGCAGGACC TCGAAGCCCT GCTGCGCCGA CCGCTCCGCC TCGCCAACGA TGCCAACTGC CTGGCCATGT CGGAGGCCGC CGACGGCGCC GGCGCGGGTG CACGTACCGT GTTCGCAGCC ATACTCGGCA CCGGGGTGGG CGGCGGCATC GTCGTCGACC AGAAACTGCT GGTGGGCGCC AACGCGGTGG CCGGCGAATG GGGCCACAAC CCGCTGCCGC TGCCCGCGCC CGACGACCTC CCCCTGCCCG CCTGCTATTG CGGACGCGCC GGCTGTATCG AGACCTACCT GTCCGGTCCC GGCCTGGCCG CCGATCATCT GCGCCATGGG GGCGAGCCCC TCGACGCTGC AGCCATCGCC CGCCAGGCCA TCGAGGGCCA GCGCGCCTCT CAGGCCAGTC TCGAACGCTA CGAGCTGCGG CTCGCGCGCG CACTCGCGGG CGTGATCAAC CTGCTCGACC CCGAGGTCAT CGTGCTCGGC GGCGGCCTGT CGCAGATCGC GCGCCTGTAC GAGCACGTAC CGCGGCGGTG GGCTGCGCAC GTGTTTTCCG ACACCGTGTC CACGCGCCTG CTGCCGGCAC GGCACGGCGA CGCCTCGGGC GTACGCGGGG CGGCCTGGCT GTGGCCGTCG AACTGA
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Protein sequence | MGTRIGIDLG GTKIELVVLD ADGRERWRRR VPTPQGDYGG TLRAIAALVE EAERLTGAGA RIGVGTPGSP SPRDGRIRNA NSTCLNGQPL QQDLEALLRR PLRLANDANC LAMSEAADGA GAGARTVFAA ILGTGVGGGI VVDQKLLVGA NAVAGEWGHN PLPLPAPDDL PLPACYCGRA GCIETYLSGP GLAADHLRHG GEPLDAAAIA RQAIEGQRAS QASLERYELR LARALAGVIN LLDPEVIVLG GGLSQIARLY EHVPRRWAAH VFSDTVSTRL LPARHGDASG VRGAAWLWPS N
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