Gene Tmz1t_3982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3982 
Symbol 
ID7873628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp4380854 
End bp4382266 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content69% 
IMG OID643700919 
Productputative metal ion efflux outer membrane protein 
Protein accessionYP_002890942 
Protein GI237654628 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGGCA GTCTCCCCAT ATCCTTGCTG GCTGCTACCG TGCTGACCGG GTGTGCCAGC 
GTTGCGATCG ATGAGAACTT CGCCGAGGTT GAGCGCTTTG CGCGCGAGCA GACGGGCAGC
GAGGTGCGCT GGCTGCGCTC GGACCCCGAG CGCGAGGCGA TGCGCACCGA GGTCGATCGG
CTGCTGGCCC AGCCGCTCGC AATTGACGAC GCGGTGCGCA TCGCGCTCGG CTACAGCCCG
GCCTTCCAGT CCCTGCTGGC GGAAGCCGCC GTGGCCTCGG CGGATGCGAC CGGTTCCGCT
CGCATCGGCA ATCCGGTGTT CACCTTCGAG CGGTTGTTTC GCTCGGGCGC CGAGGGCCGC
GAACTCGACA TCGGCCGTTC GCTCGGCATC TCGCTGTTCG ACCTGCTGTT CCTGCCTGCA
CGGCTGGAGC AGGCCGAGTT CCGCCAGCAG CAGACCCGGC TGCAGTCTTC GATTGCGCTG
TTGAGCACCG TCACGGAGGT GCGCCAGGCC TGGGTCGATG CGGTCGCGGC GCGACAGGTC
GCGCACTACC GGGAGGAAGT GGCCACGGCC GCTGGTACCG CTGCCGAACT CGCGCGTCGG
ATGCAGGCCA CGGGCAACTT CAGCCGCCTG CAGCGCGCCC GCGAGCAGGC GCTGGCCGCC
GAGGAGACGG CCAACCTGAT CCGCGCCCGT CAGAACGCCA CCGCCGCGCG CGAGGCGCTG
ATCCAGCGCT TGGGGCTGAC CCCGAGCCAG GCGCAGGCGC TACGCCTACC GGATCAGTTG
CCGGCCTTGC CCGAGGCGCC GATCGATGAA GCGACCGCCG GCGCGGCGCT GCTCGACAAC
CGGCTCGATG TGCGCATCGC CCGCACCGAC CTCGAGCGTA CGGCGAAGAG CCTGGGCCTC
ACGCAGGTGA CCAGCGTGGT CAACGGCCTG CATGTGGCCG GCGTGCGCAA CAGCGAGACC
GGCGAGTCGT CGCAGCGCGG CTTCGAAGTC GAACTGCCGC TGCCCCTGTT CGACTTCGGC
GATGCGGCCC GCGCCAGCAG TGAGGCCCGC TATCTCTCGG CCTTCAACCG CACCCTCGAG
GTTGCCAATA ACGCCAGCTC CCAGGTCCGC GTGGCCTACG AGGGCTACCG CAGTGCATAC
GACCTCGCGC GCCACTACCG CAGCGAGGTG GTTCCACTGC GTCAGAACAT TACCGAAGAG
TCGGTGCTCC AGTACAACGG GATGCTGATC GGTGTGTTCG AGCTGCTTGC CGCTGCCCGC
GCTCAGTCGG CCAGCGTGGT GCAGGCGATC GAAGCCGAAC GCGACTTCTG GCGCGCCGAG
GCCGCGCTCA AGGCCAGCCT GCTCGGCCAG CCGATCGCAC CGATCAGCCT TCAATCAAGC
GCATCGCCGG CAGAAGCCGG CGCTGGCCAC TGA
 
Protein sequence
MRGSLPISLL AATVLTGCAS VAIDENFAEV ERFAREQTGS EVRWLRSDPE REAMRTEVDR 
LLAQPLAIDD AVRIALGYSP AFQSLLAEAA VASADATGSA RIGNPVFTFE RLFRSGAEGR
ELDIGRSLGI SLFDLLFLPA RLEQAEFRQQ QTRLQSSIAL LSTVTEVRQA WVDAVAARQV
AHYREEVATA AGTAAELARR MQATGNFSRL QRAREQALAA EETANLIRAR QNATAAREAL
IQRLGLTPSQ AQALRLPDQL PALPEAPIDE ATAGAALLDN RLDVRIARTD LERTAKSLGL
TQVTSVVNGL HVAGVRNSET GESSQRGFEV ELPLPLFDFG DAARASSEAR YLSAFNRTLE
VANNASSQVR VAYEGYRSAY DLARHYRSEV VPLRQNITEE SVLQYNGMLI GVFELLAAAR
AQSASVVQAI EAERDFWRAE AALKASLLGQ PIAPISLQSS ASPAEAGAGH