| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3686 |
|---|
| Symbol | |
|---|
| ID | 7873191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 4048838 |
|---|
| End bp | 4049722 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643700632 |
|---|
| Product | Phosphomethylpyrimidine kinase type-1 |
|---|
| Protein accession | YP_002890656 |
|---|
| Protein GI | 237654342 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.532202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTCG CCATTCCGGA AACTCCCCCC TGCGTGCTGT GCCTGTCGGC GGGTGACGCC
ACGGCCGGCG GAGGACTCGC GGCCGACATC CTGACCCTGG CGAGCATGGG CTGCCACCCG
CTGCCGGTGC AGACCGCGGC GCTGGTGCGC GACACCCGCG GCATCGACGA GCTGTGGCCG
GTCGCGCCCG AGCTGATCGC CATGCAGGCG CGCGCGGTGC TCGAGGACGT GCCGGTGGCG
GCGTTCAAGC TCGGCTTCTG CGGCAGCGTC GAGAACGTCG CGGTGATCGC GGAGATCCTC
GCCGACTATC CCGACGTTCC CCTGGTGGTC GAACCCGGCC TGCACGCCGC GGCGCTGCTC
GGCGAGGCGG GCGAGGAGAT CGCCGCGGCG CTCGCCGACC TGATCCTGCC GCAGACCACG
CTGTTGGTGG CCGACCGCCA CGAGCTGCTG CGCCTGACCG GCCTGGCCGG GGACGAGGCG
GCCGAGTCCG ACGAGGAGGA CGGTGGCGGG GGAGGCCAGG GCGAGACGGG TGGCGCCGAG
CTCGACGAGG CGCTCGAGCG CCTGCTCGGC AACGGTACCG AGTACGTGCT GCTCACCGGC
GGCGGCGACC ACGGCCCGCA GCTCGTCGAC ACCCTCTTCG GCAGCGAGGG CATCGTGCGC
ACCGACGCCG GCCCGCGCCC GGCCGCGCCC TGCCTGGGTG CCGGCACCAC CCTCGCCGCC
GCCGCGGTGG CAGCGATGGC GCACGGCATG GCGCTGCCCG AGGCGGTGCG CGAGGCGCAG
GAGTTTACCC GCCAGGCCCT GCGCCACGCC TATCGCGCCG GCATGGGGCG GGCGCTGCCC
GACCGCTTCT TCTGGGCGCG CGGCAAGGGC GAGAGCGATG ACTGA
|
|---|
| Protein sequence | MPLAIPETPP CVLCLSAGDA TAGGGLAADI LTLASMGCHP LPVQTAALVR DTRGIDELWP
VAPELIAMQA RAVLEDVPVA AFKLGFCGSV ENVAVIAEIL ADYPDVPLVV EPGLHAAALL
GEAGEEIAAA LADLILPQTT LLVADRHELL RLTGLAGDEA AESDEEDGGG GGQGETGGAE
LDEALERLLG NGTEYVLLTG GGDHGPQLVD TLFGSEGIVR TDAGPRPAAP CLGAGTTLAA
AAVAAMAHGM ALPEAVREAQ EFTRQALRHA YRAGMGRALP DRFFWARGKG ESDD
|
|---|
| |