| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3537 |
|---|
| Symbol | |
|---|
| ID | 7873043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3875412 |
|---|
| End bp | 3878489 |
|---|
| Gene Length | 3078 bp |
|---|
| Protein Length | 1025 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643700478 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_002890508 |
|---|
| Protein GI | 237654194 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0823297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACGGCT TGTACCGGCG GCTGATCGAC AATCACCCGC TCGCCAACAT CGCCTTCGTG
ATGGTGCTGC TCGGCGGCCT GTTCAGTTAT CTCTCCATGC CGCGGGCGCA GGACCCCGAG
ATCAACTTCA ACTGGGTCAG CATCGTCACC GCGCTGCCCG GCGCCTCGGC GGAGGACGTC
GAGCGCGACC TCACCGGGCC GCTCGAGGAC GCACTCAAGC AGGTCAAGGA CATCCGCTTC
AGCTCCTCGT CCAGCCGCGA GGGGGTGTCG TCCATCCTGG TGCGCTTCGA GGAGCTCCCC
GAGCGGGTGT TCGACAAGCG CGTGAACGAC CTGCGCCGCG AGATCCAGAA CAAGGCCTCG
GCAGAGCTGC CGCCGGACGC CAACGACCCC GTGGTGGTCG AGTTCACCAG CTCGAACGGC
TTCCCGACCG CGATCCTGGT GCTCCATGGC GCCGGCGGCG AGACCCTGCG GCGCGCAGGC
TTCGTGATGA AGAAGGAGCT CGAGGGCCTG GACGGCGTGG ACCAGGTGAT CGCCGCCGGC
CTGGAAGATC CGCAGCTCCA CGTCGATTTT GATCCCGCCC GGGTAGCGGC GTCCGGGTTG
TCGGCGCTGC AGGTCGCCGA CAGCGTGGCG GCCTGGTTCC GCAACACCCT CGCCGGCCGG
GTGCGGGTGC AGGACCGCGA GTGGCTGGTG CGCATGGAGG GCAAGACGCC CGACCCCGAG
GCGCTCGCCC AGGCTGCGGT GGTGACGCCG GCGGGCCGGG TGGCGCTCGA CGAGGTTGCC
AGCGTGGCGC GCGGCCACGA GCGTCCGGGC CAGCTCGTGA GCTACAACGG CGCGCCGGCG
CTGATGCTGT CGATCACCAA GGATGCCGAC GCCAACACGC TCGAGCTGGT CGAGCGCCTG
CAGGACTTCG CTGCCCGGCG CAACCCGCTG CTCGCCGACC AGGGCGTGCA GCTGCGCCTG
ATCGACGACC AGACCCACGC CACCCGCCAC GCGATCGGGG TGATGGAGTC GAACGCGGTG
TTCGGCCTGT TCGCGGTGCT GGCGATGTGC TGGATCTTCC TCGGCTCGCG CCTGTCGGTG
CTGGTCGGGC TGGGCGTGCC GTTCGCGCTT GCCGGCACCT TCATCGCGGT CGACCTGATC
GGCTCCACGC TCAACCTCAC CGTGCTGCTC GGGGTCGTGA TCGCGCTCGG CATGCTGGTC
GACGACGCGG TGGTGATCGT CGAGGCGATC TACTACCGCC TGCAGCGCGG CGATCCTCCG
CACGAGGCGG TGGTGGCCGG GGTGGAGGAG GTCGGCCTGC CGGTGCTGTC CTCGGTGCTG
ACCACCATCG CCGCCTTCCT GCCGCTGATG CTGCTGCCCG GCATCCTCGG CAAGTTCATG
TTCGTGGTGC CCTTCGTGGT GACCGTCGGC TTGCTGGTCA GCCTGGTCGA GGCCTACTGG
ATCCTGCCCA CCCACATCCT GGCGCTGCGC CCGCAGCCGG CGCAGCGGCC CTCGCGGTCG
CAGCGGCTGC GCGAGCGCTT CACCCTGCGC ATCCGCATCG CCTATGCGCG TGCCCTGGTG
GCGGTGATGC GCCGCCGCCG CCTCACCGTC GCGGTCCTGG TGCTGATGAT GGCGGGTGCC
GGCGCGGCGG TGGCGACCGG CCTGGTGCGC GTGCAGTTCT TCGCCTTCGA CTCGATGCGG
CTCTTCTATG TGAACGTCGA CATGCCTGCC GGTGTCGTGC CCCAGCGCAC GCTGGCCGAG
GCCGAGCGCG CGGTGAAGGT GCTGGGCGAG ACGATCGGCG CCGACGAGCT GCGCGCGGTC
GCGGTGTATG CGGGCCTGAA GTTCACCGAG ACCGAGCCGG TGTATGGCGA CCAGTACGCC
CAGGTGCTGG TCTCGCTGCT GCCGCGCGCG GCCGGCGGGC GCGATACCGG CGAAATCATC
GACGCGGTGC GTCCGGCGAT CGAGGCGCTC GCCGGCGAAG CGAAGCTCTC CTTCATGGAG
ATGAAGGGCG GGCCGCCGAC GGCGAAGCCG ATCTCGGTGA AGATGAAGTC CGACGACTAC
CCGCAGCTGC GCGCCGCGGC CGATGCGCTC CTCGCCGAGG CGGCAAAGCT GCCCGGGGTG
CGCGATCTCA CCGACGACGA TGTGCCCGGG CGCGGCGAGA TGCGCCTCGC GCTCGATCGC
GAGAAGCTGG CGCGTGCCGG GGTGCAGCCG GCCGAGGTGG CGCGCTTGCT GCGTTTGTAC
GGCGAGGGCG AGATCGTTGC CACGACGCGC GACGGCGGCG AGAAGGTGGA GGTGGTGGTG
CGCGCCCGCC AGGAGAGCCT GGATGACGTC ACCGGGCTGC TGCAGCGCCC GGTGCCGCTG
GCCGACGGGC GCAGCGTGCA GCTGGGCGAG CTGGTGAGCC GGCAGCTGCT GCTGTCGAAG
GGCTACATCC GCCACTACCA GCTCACGCGC GCGATCACCG TCGAGGCCGA GCTCGATCGC
GAGCGCCTCG ACACGGTCGA AGCCAACGAC CGCCTGAAGG CCGCGTGGGC GCAGCTGCAG
CCGCGCTTCC CGGGCGTGGA GCTGGATTTC TCCGGCGAAC TGGAGGACAT CCAGGAGAGT
CTGGATGCGA TGGGCAAGCT GTTCGCGCTC GGCGTCGGGC TGATCTACCT GATCCTCGCC
ACCCAGTTCC GCAGCTACTG GCAGCCGCTG ATCATCCTGC TGACCGTGCC GCTCGCCTTC
ACCGGGGTGG TGCTCGGACT GCTGGTGTCG GGCAATCCGC TGTCGCTATA CACGCTGTAT
GGGGTGATCG CGCTCACCGG CATCGCGGTG AACTCGGCGA TCGTGCTCAT CGACGCCGCC
AACGAGCGCC GCGCCGTCGG CATGAGCGTG CAGCACGCCG CGATCTACGC CGCGCGCCGG
CGCGTGGTGC CGATCCTGAT CACCTCCACC ACCACCATCG GCGGGCTGCT TTCGCTGGCG
ATCGGCCTGG GCGGCAAGTC GCTGATGTGG GGACCGGTGG CGGCGAGCAT CGTGTGGGGG
CTGGGTTTTT CCACGGTGCT GACCTTGTTC GCGGTGCCGC TGGTGTATCG GATGGCGATG
CAGCGCGGTG GCGGCTAG
|
|---|
| Protein sequence | MNGLYRRLID NHPLANIAFV MVLLGGLFSY LSMPRAQDPE INFNWVSIVT ALPGASAEDV
ERDLTGPLED ALKQVKDIRF SSSSSREGVS SILVRFEELP ERVFDKRVND LRREIQNKAS
AELPPDANDP VVVEFTSSNG FPTAILVLHG AGGETLRRAG FVMKKELEGL DGVDQVIAAG
LEDPQLHVDF DPARVAASGL SALQVADSVA AWFRNTLAGR VRVQDREWLV RMEGKTPDPE
ALAQAAVVTP AGRVALDEVA SVARGHERPG QLVSYNGAPA LMLSITKDAD ANTLELVERL
QDFAARRNPL LADQGVQLRL IDDQTHATRH AIGVMESNAV FGLFAVLAMC WIFLGSRLSV
LVGLGVPFAL AGTFIAVDLI GSTLNLTVLL GVVIALGMLV DDAVVIVEAI YYRLQRGDPP
HEAVVAGVEE VGLPVLSSVL TTIAAFLPLM LLPGILGKFM FVVPFVVTVG LLVSLVEAYW
ILPTHILALR PQPAQRPSRS QRLRERFTLR IRIAYARALV AVMRRRRLTV AVLVLMMAGA
GAAVATGLVR VQFFAFDSMR LFYVNVDMPA GVVPQRTLAE AERAVKVLGE TIGADELRAV
AVYAGLKFTE TEPVYGDQYA QVLVSLLPRA AGGRDTGEII DAVRPAIEAL AGEAKLSFME
MKGGPPTAKP ISVKMKSDDY PQLRAAADAL LAEAAKLPGV RDLTDDDVPG RGEMRLALDR
EKLARAGVQP AEVARLLRLY GEGEIVATTR DGGEKVEVVV RARQESLDDV TGLLQRPVPL
ADGRSVQLGE LVSRQLLLSK GYIRHYQLTR AITVEAELDR ERLDTVEAND RLKAAWAQLQ
PRFPGVELDF SGELEDIQES LDAMGKLFAL GVGLIYLILA TQFRSYWQPL IILLTVPLAF
TGVVLGLLVS GNPLSLYTLY GVIALTGIAV NSAIVLIDAA NERRAVGMSV QHAAIYAARR
RVVPILITST TTIGGLLSLA IGLGGKSLMW GPVAASIVWG LGFSTVLTLF AVPLVYRMAM
QRGGG
|
|---|
| |