| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3476 |
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| Symbol | |
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| ID | 7872982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 3810011 |
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| End bp | 3811159 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643700416 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002890447 |
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| Protein GI | 237654133 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACCC CCCGCCGCCT CTTCGTTCTC GCACTCGTCG CGGCGCTGGT GGGCGCGGGG
ATCTGGTGGA TGACCCGCCC GCAGCCGATC GAGGTGGCGG TGCACGAGGT GGCCCGCGGT
ACGGTCGAGG CCACGCTGAC CAACACCCGC GCCGGCGAGG TCGAGGCCTG CCAGCGCGCG
AAGATGGCGA CGATCGCGGG CGGGCGGATC GAGTGGCTGG GCGTGGAGGA AGGCGACCGC
GTCGAGGCCG GACAGGTGCT GATGCGGCTG TGGCATGGTG ACCTCGACGC GCGCGCGGCG
GTCGTGCGCG CCCAGCTCGC CACCGCCCGC CAGCGCGTGC AGGAGGCGTG CGCCGTGGCG
GCCAACGCCG AGCGCGAGGC CGCGCGCCAG GCGCAGCTGG TGAAGCGCGG CTTCGTGTCC
GCCAGCGCCG AGGAGAGGGC CCGCACCGAG GCGCGTGCCC GCCGCGCCGC CTGCGACACC
GCGCAGGCCG ACATCGCCAC CGCCCAGGCC CAGCTCGTCG CGACCGAAAC CGAGCGCCAG
CGCCTGGTGT TGGTTGCGCC CTTCGCCGGC ACCGTGGCCA AGATCAGCGG CGAGCTGGGC
GAATACGCGA CGCCCTCCCC GCCCGGCGTG CCGATGCCGC CGGCGATCGA CCTGATCGAC
GACTCCTGCC TGTACGTGAA GGCGCCGATG GACGAAATCG ACGCACCGAA GATCCGGCCC
GGGCTGCCGG TACGCATCAC GCTCGAGGCC ATCCCCGGCA AGGTCTTCGA AGGCCGCGTG
CGCCGTGTCG CGCCGTATAT CACCGCGGTG GAGAAGCAGG CGCGCACGGT GGCGGTGGAT
GTGGATTTCG CGGACCCGGC CGAGGCGCAC GGGATGCTGG TGGGCTACAG CACGGACGTG
GAGATCGTGC TCGCGACACG TGCGGAGGTG CTGCGCGTCC CGACCGGGGC CTTGCGGGAG
GGCGGCAAGG TGCTGGTGGT CGAGGGCGAC ACGCTGGTCG AACGCACGCT GCGGACGGGC
GTGGCGAACT GGGAGTTCAC CGAGGTGGTG TCGGGACTGG CTGCGGGGGA GAGGATTGTG
ACGTCGCTCG AGCGGGAGGG GGTGATGGCG GGGGCGAAGG TGGCGCTGCG GCCGGAAGAG
GCGCGGTAG
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| Protein sequence | MKTPRRLFVL ALVAALVGAG IWWMTRPQPI EVAVHEVARG TVEATLTNTR AGEVEACQRA
KMATIAGGRI EWLGVEEGDR VEAGQVLMRL WHGDLDARAA VVRAQLATAR QRVQEACAVA
ANAEREAARQ AQLVKRGFVS ASAEERARTE ARARRAACDT AQADIATAQA QLVATETERQ
RLVLVAPFAG TVAKISGELG EYATPSPPGV PMPPAIDLID DSCLYVKAPM DEIDAPKIRP
GLPVRITLEA IPGKVFEGRV RRVAPYITAV EKQARTVAVD VDFADPAEAH GMLVGYSTDV
EIVLATRAEV LRVPTGALRE GGKVLVVEGD TLVERTLRTG VANWEFTEVV SGLAAGERIV
TSLEREGVMA GAKVALRPEE AR
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