Gene Tmz1t_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3440 
Symbol 
ID7873931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp3764677 
End bp3765129 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content77% 
IMG OID643700380 
Productprotein of unknown function UPF0102 
Protein accessionYP_002890411 
Protein GI237654097 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.745172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGGGA GATCCGGAGG CTGGACGCGC AGCGCGGGCG AGGACGCCCG GGGCGCGCAC 
GCGGGGGCGG ACAGTATCGG CGCACGCCCG ACGCCGGCGC AAGCGCGCGG CGCCGCTGCC 
GAGGCGCTCG CCGCCGAACA CCTTGCCGCA CACGGCCTGC GCGTGATCGC GCGCAACGTG 
CGCTGCCGCG GCGGCGAGGT CGACCTGGTC TGCCTCGACC GCAGCCACGT CGTCTTCGTC 
GAGGTGCGCC TGCGCCGCAA CAACCGCTTC GGCGGCGCCG CCGAGAGCAT CACCGCGGCC 
AAGCAGCGCC GCGTGCTGAT CGCCGCGCAG TGGTGGCTGG GCGGCGCCGG GCGGCGCTTT 
CGCGACGCAG CCTGCCGCTT CGACGCGGTG CTGCTCGACG CGCTCGACCC GGCGCGCATC 
ATCTGGCTCC CGGGGGCCTT CGATGCCGGC TGA
 
Protein sequence
MGGRSGGWTR SAGEDARGAH AGADSIGARP TPAQARGAAA EALAAEHLAA HGLRVIARNV 
RCRGGEVDLV CLDRSHVVFV EVRLRRNNRF GGAAESITAA KQRRVLIAAQ WWLGGAGRRF 
RDAACRFDAV LLDALDPARI IWLPGAFDAG