| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3185 |
|---|
| Symbol | |
|---|
| ID | 7874325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3464875 |
|---|
| End bp | 3465891 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643700113 |
|---|
| Product | AAA ATPase |
|---|
| Protein accession | YP_002890157 |
|---|
| Protein GI | 237653843 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.820352 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTC AGACTCCAAA TAGCTTCACA CCAAGCGCAT CACCGATGAG CGGCCAGCGC
ATCCGCCATC CCCGCATTGC GGCCACTATT GAGGAGTGCC GGCTAATGCT GGACGCCGGC
GACAACGCGA ACCTCATCGT ACTGTGCGGC CCAACGGGGG TCGGCAAGAC AACGCTCGGC
GACTTTCTCG TCGAAGCCGA ACTCACGGCC GAAGCAACGA CGCTGTCCCA GGATCCGGGC
TACATGCCGG CGATTCGCCT TGAGGCACCG GCGTCTGGCG AACGCGACTT CTCCTGGCGC
CTGTTTTACC AGCGAATGCT CGATGCACTC GAGGGCGAAT TGGATGCACC GCGCACTGCC
TACGGCATCG ACCCGGAAAG CGGAAAGGTT GTGCGCCCTG TGGGTCCGCA AACCAACCGC
CTCTCGGGTT TGCGCACGGC CGTGGAGCGT TCCCTGCGCA ATCGCGGCAC GCGATTCGTT
GTCGTCGATG AGGCGGCGCA CATGATGCGC CAGTGTCATC CGAGCCGGCT CGTCGAACAG
TTCAATACGC TCAAGTCACT CTCGAACGAG TACCACGTGC AATGGATTCT CCTCGGCTCA
TACGACCTCT TCGAACTTGT CTCACTGAGT GCGCAGCTTG CGCGACGGAC GCACGTGATC
CATTTCGGCC GCTACCGAGA AGACGTCGCC GAGGACGTCC GCTCGTTCCG TGGCTGCCTG
AAGAAGCTGG GCGAGAGCAT GCCAGCCTTG AAGGAGCTCG ACCTCTTGCG TTACGCCGAG
GTGTTCCACC AGAACACCCT GGGGTGCGTC GGCACGCTGC GCACGGTGCT TGTGCGACTG
AACCTGCTGG TCGCCGAGAA GGACTGGTCG GAGGACACGT TGTGTAAGGC GCTCCTCACC
GAAGCTCAGG TTACGCAGAT CATGCGTGAG ATCGTGGAGG GCGAGGAACG CATTGCGCCG
GGCCTCAAGC GCAATCTGGC CGTGCAACAG CCCCAGACCG GTCGGAGGGT TGCGTGA
|
|---|
| Protein sequence | MTIQTPNSFT PSASPMSGQR IRHPRIAATI EECRLMLDAG DNANLIVLCG PTGVGKTTLG
DFLVEAELTA EATTLSQDPG YMPAIRLEAP ASGERDFSWR LFYQRMLDAL EGELDAPRTA
YGIDPESGKV VRPVGPQTNR LSGLRTAVER SLRNRGTRFV VVDEAAHMMR QCHPSRLVEQ
FNTLKSLSNE YHVQWILLGS YDLFELVSLS AQLARRTHVI HFGRYREDVA EDVRSFRGCL
KKLGESMPAL KELDLLRYAE VFHQNTLGCV GTLRTVLVRL NLLVAEKDWS EDTLCKALLT
EAQVTQIMRE IVEGEERIAP GLKRNLAVQQ PQTGRRVA
|
|---|
| |