Gene Tmz1t_2930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2930 
Symbol 
ID7873832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3169084 
End bp3169536 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content66% 
IMG OID643699851 
ProductPIN domain protein 
Protein accessionYP_002889906 
Protein GI237653592 
COG category[R] General function prediction only 
COG ID[COG5573] Predicted nucleic-acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG CGCTGGACAC CAACATCCTC GCCTACGCAG AGGGCGCCGG AGACGACGCG 
CGTTGTGCAG CGGCTCGTGC GCTGATCGCG GATCTCGCGG CGAGCGAGGT GCTGATCCCG
GCGCAGGCCT TGGGTGAGTT GCACCGGGTC CTCACCGGCA AGCTCAGGCG CGACGCCGAG
ACAGTGCGCG GCGCCCTGCT CGACTGGTCC GATGCCTACG AGGTGGCCGA TTCGACCTGG
CCGAGCTTCC AGGCCGCCAT CGACCTGGCC TGCGATCACC GCATGCAGAT CTGGGATGGC
CTGGTCCTTT CGGTGGCTGC GGAAAACCGT TGCCGCCTGC TGCTGAGCGA AGACCTGCAG
CACGGCTTCA CCTGGCGCGG CGTCACCGTT ATCAATCCTT TCGAGCATGT CGCGCACCCG
CTACTGCTCG CAGCATGCAA TTCGAGCTCA TGA
 
Protein sequence
MKIALDTNIL AYAEGAGDDA RCAAARALIA DLAASEVLIP AQALGELHRV LTGKLRRDAE 
TVRGALLDWS DAYEVADSTW PSFQAAIDLA CDHRMQIWDG LVLSVAAENR CRLLLSEDLQ
HGFTWRGVTV INPFEHVAHP LLLAACNSSS