| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2664 |
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| Symbol | |
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| ID | 7873406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2888474 |
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| End bp | 2889010 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643699587 |
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| Product | fimbrial biogenesis protein |
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| Protein accession | YP_002889643 |
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| Protein GI | 237653329 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.470161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGACGC CGATCCAGCG CGGTTTCGGC CTGGTCGAGG CCATGGTGAC GATCGCAGTC
TTAGCGATCC TGCTCGCGGT CGCCGTACCC AGCTTCCAGC AGATGATCGT CAACGGCCGC
ACCCGCACCA TCGCCGAATC CTTCCGCGCC GGTGTGGATC TGGCCCGTAC CGAGGCGATG
CGGCGCAATC TGCCGGTCGG GTTCGCCGTC GTCTCCGCCG TCACCGGCTG CAGCGCCGAC
ACCACCGGCA CGAACTGGGT GGTCTTCTTG GGCACGACCT GCAACAACGA CGCGACGGTG
GTGCAAAGGT TCGTCGCCGG GGGTAGTGAG GCGGGCGTCA CGGTCAGCAC CTCGAGGGGC
ACGCTCATCT TCAACGGGAT CGGCATGAGT GTGGGCGGAG CCACGGCCAC CATCGACTTC
GGCAACAATC TCCCCTCCGC ACAACGACGT ACGCTCCGCC TGGGCGTCAG CGCGGGCGGC
CAGACCCGCC TGTGCGAGCC CGGCATCACC GCCAGCGGCG ACCCGCGTGC CTGTTGA
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| Protein sequence | MRTPIQRGFG LVEAMVTIAV LAILLAVAVP SFQQMIVNGR TRTIAESFRA GVDLARTEAM
RRNLPVGFAV VSAVTGCSAD TTGTNWVVFL GTTCNNDATV VQRFVAGGSE AGVTVSTSRG
TLIFNGIGMS VGGATATIDF GNNLPSAQRR TLRLGVSAGG QTRLCEPGIT ASGDPRAC
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