Gene Tmz1t_2494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2494 
Symbol 
ID7873933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2696059 
End bp2697198 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content69% 
IMG OID643699416 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002889473 
Protein GI237653159 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.564109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCG CCAAGCTCGT CGTCGCGCTC TCCGCCACCT TCACCCTCAG CTCCGCTGCG 
TTCGCCGACA TCACCATCGG GGTCTCGCTC TCGGCCACCG GCCCGGCCGC CTCGCTCGGC
ATCCCCGAGA AGAACGCCTT CGCCCTGCTG CCGACCGAGA TCGGCGGCGA GAAGGTCAAG
CTGGTCGTGC TGGACGACGC CACCGATCCC ACCGTGGCCA CCAAGAATGC CCGCCGCCTG
GTCACCGAGG ACCGCGTGGA TGCGATCATC GGTTCGTCCA GCACCCCGGC CACCGCCGCG
ATGGCCGAGG TGGCGCACGA GACCAAGACC CCGCTGGTGA CGATGAGCCC GGTGTCCCTG
CCGGTCGAGC GCAACGAGTG GGTCTTCCGC ACGCCGCAGC AGAACGAGGT GATGGCGAGC
GCGCTGGTCG AGCACATGAA GTCCAAGGGC TACAAGACGC TCGGCTTCAT CGGCTTCTCC
GACGCCTACG GCGAGGACTG GCTGAACTCG GTGACCAAGC ACGCCGGGGC GGCCGGCATC
CAGCTCACCG TGGTCGAGCG CTACAACCGC AACGACACCT CGGTGACCGG CCAGGTGCTC
AAGCTCACCA CGGCGCGCCC GGATGCCGTG CTGGTCGCCG GTTCGGGCAG CCCCGCCGCG
CTGCCGCAGG GCGCGCTGGT CGAGCGCGGC TACAAGGGCC AGATCTACCA GACCCACGCC
GCCGCCAACC AGGCCTTCCT CGGTGTCGCC GGCAAGGCGG CCGAGGGCGC GATCCTCCCG
GTGGGGCCGG TCTCGGTCGT CAGGCAGCTT CCCGACAGCC ATCCCTCCAA GGCCTCCGGT
GTCGATTTCG TCACGAAGTA CGAGGTCCAG TACGGCGCGG GCAGCTTCTC CGCCTTTGCC
GGCTATGCCC ACGACGCCTT CCGCCTGATC GAGGCCGCAG TGCCCGCGGC AAAGGCCAAG
GGCGCGCCCG GTACCGCCGA GTTCCGCGCC GCGCTGCGCG ATGCGCTCGA GGCGAGCAAG
GAGGTGGTGG GCGTGCATGG GGTGTTCAAC ATGACCCCGA ACGACCACTT CGGCCTGGAC
GACCGTTCCC GCGTGCTGAT CCGCATCGAA GGCGGCGCCT ACAAGCTGGT CGCGCAGTAA
 
Protein sequence
MKLAKLVVAL SATFTLSSAA FADITIGVSL SATGPAASLG IPEKNAFALL PTEIGGEKVK 
LVVLDDATDP TVATKNARRL VTEDRVDAII GSSSTPATAA MAEVAHETKT PLVTMSPVSL
PVERNEWVFR TPQQNEVMAS ALVEHMKSKG YKTLGFIGFS DAYGEDWLNS VTKHAGAAGI
QLTVVERYNR NDTSVTGQVL KLTTARPDAV LVAGSGSPAA LPQGALVERG YKGQIYQTHA
AANQAFLGVA GKAAEGAILP VGPVSVVRQL PDSHPSKASG VDFVTKYEVQ YGAGSFSAFA
GYAHDAFRLI EAAVPAAKAK GAPGTAEFRA ALRDALEASK EVVGVHGVFN MTPNDHFGLD
DRSRVLIRIE GGAYKLVAQ