Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2494 |
Symbol | |
ID | 7873933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 2696059 |
End bp | 2697198 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643699416 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002889473 |
Protein GI | 237653159 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.564109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCG CCAAGCTCGT CGTCGCGCTC TCCGCCACCT TCACCCTCAG CTCCGCTGCG TTCGCCGACA TCACCATCGG GGTCTCGCTC TCGGCCACCG GCCCGGCCGC CTCGCTCGGC ATCCCCGAGA AGAACGCCTT CGCCCTGCTG CCGACCGAGA TCGGCGGCGA GAAGGTCAAG CTGGTCGTGC TGGACGACGC CACCGATCCC ACCGTGGCCA CCAAGAATGC CCGCCGCCTG GTCACCGAGG ACCGCGTGGA TGCGATCATC GGTTCGTCCA GCACCCCGGC CACCGCCGCG ATGGCCGAGG TGGCGCACGA GACCAAGACC CCGCTGGTGA CGATGAGCCC GGTGTCCCTG CCGGTCGAGC GCAACGAGTG GGTCTTCCGC ACGCCGCAGC AGAACGAGGT GATGGCGAGC GCGCTGGTCG AGCACATGAA GTCCAAGGGC TACAAGACGC TCGGCTTCAT CGGCTTCTCC GACGCCTACG GCGAGGACTG GCTGAACTCG GTGACCAAGC ACGCCGGGGC GGCCGGCATC CAGCTCACCG TGGTCGAGCG CTACAACCGC AACGACACCT CGGTGACCGG CCAGGTGCTC AAGCTCACCA CGGCGCGCCC GGATGCCGTG CTGGTCGCCG GTTCGGGCAG CCCCGCCGCG CTGCCGCAGG GCGCGCTGGT CGAGCGCGGC TACAAGGGCC AGATCTACCA GACCCACGCC GCCGCCAACC AGGCCTTCCT CGGTGTCGCC GGCAAGGCGG CCGAGGGCGC GATCCTCCCG GTGGGGCCGG TCTCGGTCGT CAGGCAGCTT CCCGACAGCC ATCCCTCCAA GGCCTCCGGT GTCGATTTCG TCACGAAGTA CGAGGTCCAG TACGGCGCGG GCAGCTTCTC CGCCTTTGCC GGCTATGCCC ACGACGCCTT CCGCCTGATC GAGGCCGCAG TGCCCGCGGC AAAGGCCAAG GGCGCGCCCG GTACCGCCGA GTTCCGCGCC GCGCTGCGCG ATGCGCTCGA GGCGAGCAAG GAGGTGGTGG GCGTGCATGG GGTGTTCAAC ATGACCCCGA ACGACCACTT CGGCCTGGAC GACCGTTCCC GCGTGCTGAT CCGCATCGAA GGCGGCGCCT ACAAGCTGGT CGCGCAGTAA
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Protein sequence | MKLAKLVVAL SATFTLSSAA FADITIGVSL SATGPAASLG IPEKNAFALL PTEIGGEKVK LVVLDDATDP TVATKNARRL VTEDRVDAII GSSSTPATAA MAEVAHETKT PLVTMSPVSL PVERNEWVFR TPQQNEVMAS ALVEHMKSKG YKTLGFIGFS DAYGEDWLNS VTKHAGAAGI QLTVVERYNR NDTSVTGQVL KLTTARPDAV LVAGSGSPAA LPQGALVERG YKGQIYQTHA AANQAFLGVA GKAAEGAILP VGPVSVVRQL PDSHPSKASG VDFVTKYEVQ YGAGSFSAFA GYAHDAFRLI EAAVPAAKAK GAPGTAEFRA ALRDALEASK EVVGVHGVFN MTPNDHFGLD DRSRVLIRIE GGAYKLVAQ
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