Gene Tmz1t_2482 details

Gene Information

• Locus tag: Tmz1t_2482
• ID: 7874165
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 2681933
• End bp: 2682547
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643699404
• Product: cold-shock DNA-binding domain protein
• Protein accession: YP_002889461
• Protein GI: 237653147
• COG category: [S] Function unknown
• COG ID: [COG3326] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCCACC AAGGAAAGAT CACCACCTGG AAGGACGACA AAGGCTTCGG CTTCATCACC 
CCCAACGGCG GCGGCGAGCC GGTTTTCGTC CACGTCAGCA GCCTTGCCAA CCGCCAGCGC 
CGGCCCGAAG GCACGGAGCT GGTGAGCTAC GAACTCGCCA CCGATGCCAA GGGACGACTG 
CAGGCGAAGG CCGTCGCCTT TGTCGGCGAG CGCGCGGTAG CGCCTGCGGC GCCGGGGCGC 
AGCAGCCTGC CACCGCTTTT CGCGGCGGGC TTCGTCGGCT GGTTGGGCGT GATGGCCTGG 
CTCGGGCGGC TGTCGCTGGC GGTGCTCGCG CTTTACGCGG CGGCGAGCGT CGTCGCCTTC 
CTCGCCTACG GGCACGACAA GTCGGCCGCC GTGCGCGACG CCTGGCGCGT CAAGGAGAAC 
ACGTTGCACC TGTTCGCCCT GCTCGGCGGC TGGCCGGGGG CGCTGGTGGC GCAGCGGCTG 
TTCCGCCACA AGTCTTCCAA GGCCTCGTTC CAGACCACCT ACTGGATCAC CGTCGTGCTC 
AACTGCGCGG CGCTCGCCTG GCTGCTGTCG CCCCACGGGG CGCAGACGCT GCAGGCGGTG 
CTGGCCGCGA TCTGA 

 

Protein sequence

MRHQGKITTW KDDKGFGFIT PNGGGEPVFV HVSSLANRQR RPEGTELVSY ELATDAKGRL 
QAKAVAFVGE RAVAPAAPGR SSLPPLFAAG FVGWLGVMAW LGRLSLAVLA LYAAASVVAF 
LAYGHDKSAA VRDAWRVKEN TLHLFALLGG WPGALVAQRL FRHKSSKASF QTTYWITVVL 
NCAALAWLLS PHGAQTLQAV LAAI