| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2331 |
|---|
| Symbol | |
|---|
| ID | 7085318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 4493760 |
|---|
| End bp | 4495418 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643701021 |
|---|
| Product | 60 kDa inner membrane insertion protein |
|---|
| Protein accession | YP_002355964 |
|---|
| Protein GI | 217970730 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0706] Preprotein translocase subunit YidC |
|---|
| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAAC GCCGCCTCAT CCTCTTTCTG ATTTTCTCCT TCTCGCTCGT CATGCTGTGG
GACGGCTGGA TCAAGCAGAA CCAGCCTCCC GTGGCCCAGC AGCAGGCCGC CGCCGGAAGC
GCGGCGCCGG CCGACGGCGC GGTGCCCACG CCCACGTTGA GCGCCACGCC CGGCCAGCCG
GTGGTGCCGG GCGAGCAGGC CGCCCAGGCT GCGGCCGCGC CGCGTGCCGT GGTCGAGACC
GATCTGCTGC GTGCCGAGGT CTCGGCGCAG GGCGGTGACA TCGTTCGCCT CGAGCTCAAG
CAGCACAAGG CGAGCGGCGA GGCGGGCGGC AACTTCGTGC TGCTCGACGA CGGCACCACG
CGGCACCAGT ACGCCGCGCA GTCGGGCCTG ATCGGCGAGG GCCTGCCCAC CCACAAGACC
CTGTTCCAGC TGCCCGCTGG CGAGCTGCGC CTGAAGGACG GCGAGAACGG CGTGGAGCTG
CGTCTGCAGG CGCCCGAGCA GAACGGCGTG CAGGTCACCA AGGTGATGCG CTTCGCGCGC
GGCAGCTACC TGATCGACGT GTCCTACGAG ATCCGCAACG GATCGGGCCA GGCGCTCGCG
CCGCACGCCT ACTTCCAGCT CACCCGCGAC GGCAACCCGG CCGAGCAGGT CGAGGCCTTC
GGCGTCACCA CCTTCACCGG TCCGGCCTTC TACACCGACG CCAACAAGTT CCAGAAGGTG
CAGTTCGCCG ACATCACCGA CGGCGACGCC AAGTTCCCCA AGACCGCGGC CGACGGCTGG
GTGGCGATGG TGCAGCACTA CTTCGTCGGC GCCTGGCTGC CGAAGGCAGG CGAGCAGCGC
GAGTACTTCG CGCGCGCGCT CGGCAACAAC CTGTTCTCGG CGGGCGTGAT CCTGCCGGTG
GCCTCGATCG CCACGGGCGC CGAGGGTGCG GTGTCTACCC GTCTGTACGC CGGTCCGCAG
GAACAGGACA AGCTCGAGGG CATCGCCCCG GGCCTCGACC TCGTGGTCGA CTATGGCTGG
CTGACCGTGA TCGCGGCGCC GCTGTTCTGG GTGCTGTCCT GGTTCCACAA CCTGACTGGC
AACTGGGGCT GGGCGATCAT CCTGGTCACC GTCGCGATCA AGGCGATCTT CTTCCCGCTG
TCGGCGGCGA GCTACAAGTC GATGGCCAAG ATGCGCGTGC TCGGCCCCCG CCTGCAGCGC
ATGAAGGAGA TGTACGGCAA CGACAAGGCC AAGATGCAGC AGGAGATGAT GAATCTCTAC
CGCACCGAGA AGATCAACCC GCTCGGCGGC TGCCTGCCGA TCCTGGTGCA GATCCCGGTG
TTCATCGCCC TGTACTGGGT GCTGCTCGGC AGCGTCGAGA TGCGCCACGC GCCGTGGCTG
GGCTGGATCC AGGACCTCTC GGCCAAGGAC CCCTACTTCA TCCTGCCGAT CATCATGGGC
GTGTCCATGC TCGTGCAGAT GAAGCTCAAC CCGACGCCGC CGGATCCGAT CCAGGCCAAG
GTCATGATGG CGATGCCGAT CATCTTCACC TTCATGTTCC TGTGGTTCCC GTCCGGCCTG
GTGCTGTACT GGGTGGTGAA CAACTGCCTG TCGATCGCCC AGCAGTGGCA GATCACGCGG
ATGATCGAAA GTGGAAAGTC GGCCGGCAAG CCCGCCTGA
|
|---|
| Protein sequence | MDQRRLILFL IFSFSLVMLW DGWIKQNQPP VAQQQAAAGS AAPADGAVPT PTLSATPGQP
VVPGEQAAQA AAAPRAVVET DLLRAEVSAQ GGDIVRLELK QHKASGEAGG NFVLLDDGTT
RHQYAAQSGL IGEGLPTHKT LFQLPAGELR LKDGENGVEL RLQAPEQNGV QVTKVMRFAR
GSYLIDVSYE IRNGSGQALA PHAYFQLTRD GNPAEQVEAF GVTTFTGPAF YTDANKFQKV
QFADITDGDA KFPKTAADGW VAMVQHYFVG AWLPKAGEQR EYFARALGNN LFSAGVILPV
ASIATGAEGA VSTRLYAGPQ EQDKLEGIAP GLDLVVDYGW LTVIAAPLFW VLSWFHNLTG
NWGWAIILVT VAIKAIFFPL SAASYKSMAK MRVLGPRLQR MKEMYGNDKA KMQQEMMNLY
RTEKINPLGG CLPILVQIPV FIALYWVLLG SVEMRHAPWL GWIQDLSAKD PYFILPIIMG
VSMLVQMKLN PTPPDPIQAK VMMAMPIIFT FMFLWFPSGL VLYWVVNNCL SIAQQWQITR
MIESGKSAGK PA
|
|---|
| |