Gene Tmz1t_2283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2283 
Symbol 
ID7083715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2569854 
End bp2570375 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content74% 
IMG OID643699302 
Producthypothetical protein 
Protein accessionYP_002355918 
Protein GI217970684 
COG category[R] General function prediction only 
COG ID[COG3577] Predicted aspartyl protease 
TIGRFAM ID[TIGR02281] clan AA aspartic protease, TIGR02281 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.212242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACACAC CCGACGCCGA CACCCGCCGC ATCGGCCGCA GGCTGGGCCT GCTGGCGACG 
CTCGCCTTTC TCGCGCTGGG CTGGGTGAGC TTCGACGGCG CGCTCGAGCG CCGCGAGGAC
CCCAACCGTA ATCTCGTGGT CGCCCCCGGC GCCAGCGAGC TGGTGCTGCA GCGCAACCGC
GCCGGGCACT ACCTGCTGCC CGGCGAGATC AACGGCCGTC CGGTGCGCCT GCTGCTCGAC
ACCGGCGCGA CGCAGGTGTC GGTCCCTGCG CGCCTCGCCG CGGAGCTTGG GCTGCAGGCG
GGCGCGCCGG CCTCGGTGCT GACCGCCAAC GGCGCGGTCA CGGTGCGCCA GACGCGCATC
CCGCGCCTCG CCTTCGGCCC CTTCGAGTTC CGCGACGTGG CCGGCCACCT GAACCCTGGC
ATGCAGGGCG ACGAGGTGCT GCTCGGCATG TCGGCGCTGC GTCACCTGGA GTTTACCCAG
CGCGGCGACA CGCTCACCCT GCGCGCGCCG GGTTCCGGCT AG
 
Protein sequence
MNTPDADTRR IGRRLGLLAT LAFLALGWVS FDGALERRED PNRNLVVAPG ASELVLQRNR 
AGHYLLPGEI NGRPVRLLLD TGATQVSVPA RLAAELGLQA GAPASVLTAN GAVTVRQTRI
PRLAFGPFEF RDVAGHLNPG MQGDEVLLGM SALRHLEFTQ RGDTLTLRAP GSG