Gene Tmz1t_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2212 
Symbol 
ID7085565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp2492487 
End bp2493047 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content73% 
IMG OID643699232 
Product2'-5' RNA ligase 
Protein accessionYP_002355848 
Protein GI217970614 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAG CTGCAGCGGA CGCGGGGAGG GCGCCGAATC TGCGGCTCTT CTTCGCGCTG 
TGGCCGGATG CCGCCACCCG CGCCGGGCTG CATGCGCGTG CACGGGCGCT GCATTCCGAG 
TGCGGCGGTC GCGCGATGCG TCGTGACACC ATCCACCTGA CCCTGGCCTT CCTCGGCGAA 
ACGCCTGTGC GGCAGGTGGA GCGATTGCGC GCGGTGGCCG CGGGCGTCCA GGGGGAGGGC 
TTCGCGCTCG ACCTCGATCG CGTCGGCAGC TGGCATCGCA ACCGGATCCT GTGGACCGGT 
CCGTCGATGG TGCCGCCAGC GCTGGCCGCG CTCGCGCAGG ATCTGGAAGG ACGGCTGCGC 
GCGGACGGCT GCGCACTCGA GGCGCGTGCC TTCTCCCCGC ATGTCACCCT CGTGCGCAAC 
GCCCACGCGG CGCCCCGCGA GGCGCAGCTC GCGCCTCTGC GATGGACGGT CGGCAGCTTC 
GTCCTGGTCG CCTCCGAGCT CAGCGCCGCC GGTGCGCACT ACCGCACGAT CGGGCGCTGG 
CCGTTGAAGC GGCGTGGGTG A
 
Protein sequence
MAEAAADAGR APNLRLFFAL WPDAATRAGL HARARALHSE CGGRAMRRDT IHLTLAFLGE 
TPVRQVERLR AVAAGVQGEG FALDLDRVGS WHRNRILWTG PSMVPPALAA LAQDLEGRLR 
ADGCALEARA FSPHVTLVRN AHAAPREAQL APLRWTVGSF VLVASELSAA GAHYRTIGRW 
PLKRRG