| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2157 |
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| Symbol | |
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| ID | 7085510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2431094 |
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| End bp | 2431942 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643699177 |
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| Product | squalene synthase HpnC |
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| Protein accession | YP_002355793 |
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| Protein GI | 217970559 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.324406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGTCG AGCACTACGA GAACTTCCCT GTCGCCTCAC TGCTGTTGCC GGCCCGCCTG
CGCGAGCCGG TGGAGGCGAT CTACGCCTTC GCGCGCGGGG CCGACGACGT CGCCGACGAG
GGCGACGCGC CCGCGGTGGC GCGGTTGGCG CGCCTGCACG ACTACCAGCT CGGGCTCCAG
GCCTGCGCGC AGGGCCGGCC GGTGGCCGAC GCGACGCTGG CGCCGATGTT CGCCCGCCTC
GGCCGTGCGA TACATACCCA TGCGCTGCCG CTGCAGCCTT TCCGCGACCT GCTCGACGCC
TTCATGCAGG ACGTCGGCAA GACGCGCTAC GCCGACTTCG CAGAGCTGCG CGACTACTGC
CGGCGCTCGG CCGACCCGGT GGGGCGCCTG ATGCTGCATC TGTATGGCGC GGCGGACGCG
GAGAACCTGC GCCGCTCGGA CGCGATCTGC ACCGCCCTGC AGCTGATCAA CTTCTGGCAG
GACGTCGCGG TCGACTGGGA AAAGCGGCGC ATCTACCTGC CGCTCGACGA TCTCGCCCGC
TTTGGCCTCG ACGAGCCCGC GCTCGACGCG CTCGCCCGCG GCGAACGCAG CCCGGGCGAG
GACTGGCGCG CGCTGATGGC CTTCGAGGTG CGGCGTGCTC GCACGATGAT GCTCGACGGC
GCCCCGCTCG CCCGTACCCT GCGCGGGCGC GTCGGCTGGG AGTTGCGACT GGTCGTGCTG
GGCGGGCTGC GCATTCTCGA AGGGATCGAG GCGGTCGGCT ACGATGTCTT CCACCACCGC
CCCGCGCTTG GTCGCGGCGA CTGGGCGCGC CTGGGCTGGC GCGCGCTGAA TTACGGAAAA
CTCGGATGA
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| Protein sequence | MPVEHYENFP VASLLLPARL REPVEAIYAF ARGADDVADE GDAPAVARLA RLHDYQLGLQ
ACAQGRPVAD ATLAPMFARL GRAIHTHALP LQPFRDLLDA FMQDVGKTRY ADFAELRDYC
RRSADPVGRL MLHLYGAADA ENLRRSDAIC TALQLINFWQ DVAVDWEKRR IYLPLDDLAR
FGLDEPALDA LARGERSPGE DWRALMAFEV RRARTMMLDG APLARTLRGR VGWELRLVVL
GGLRILEGIE AVGYDVFHHR PALGRGDWAR LGWRALNYGK LG
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