Gene Tmz1t_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2069 
Symbol 
ID7085339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp2339016 
End bp2339717 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content60% 
IMG OID643699091 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002355708 
Protein GI217970474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.620568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAATC ATGCCGAAAC AACCAGCGGC CACGAGGCCC GCAGTGCCAA GACCCGATCG 
CAGTTGATCG AAGCGACGAT TGACGTTGTC GCTGCCGTTG GCTACGAGGG GGCAACCACA 
CGTGCCTTGT CCCAAGCGGC TAAAACCACG CTGTCGGCCA TTCCCTACCA TTTCGGCAGC 
AAGAAGGAAC TCTATCTGGC CGCAGCGGAC ATGATCGCCG AATATGCGGC CATTCGCTTC 
GCGGAAGCCG CAGCCTTGCT TGACGATACG TCGGACGTCG GGCTTTCCGC TCGCTTCGAA 
CTCGCACTGA TCCAACTGCT CCACACCATG CTGGAGGAAG CCGAGCCGCA TGCCTGGACG 
GCATTCGTGG CCCGCTGCGC TTACGACAAC GACGACGCCT TCGCCCTGAT TTACGGACGC 
GCAATCGCTC CGCTGCAGGA GCGTCTAGTG CATGCCGCCA GCCAGTTTAG CGGCAGATCT 
TCCGATGACG AGGCACTGCG GCTGCGCGTC ATCGCAATTC TGACGGCAAT TTTCAGTTTC 
AGGTTTCTGC GCGGCGTGAT GCTCCGTGGC ATGGACTGGC AAAGCATTCA GAACGAAGCC 
GTCAGGCAGA TCACGGACAT GGTCCGCGAT CTCTGCCGAA GCGGCTTTCT TGCTGTTCGG 
CCGGCTGATG ACAGCGCGAA CCGAAAAACA GGCCCCACTT GA
 
Protein sequence
MPNHAETTSG HEARSAKTRS QLIEATIDVV AAVGYEGATT RALSQAAKTT LSAIPYHFGS 
KKELYLAAAD MIAEYAAIRF AEAAALLDDT SDVGLSARFE LALIQLLHTM LEEAEPHAWT 
AFVARCAYDN DDAFALIYGR AIAPLQERLV HAASQFSGRS SDDEALRLRV IAILTAIFSF 
RFLRGVMLRG MDWQSIQNEA VRQITDMVRD LCRSGFLAVR PADDSANRKT GPT