| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1804 |
|---|
| Symbol | |
|---|
| ID | 7084226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 2026067 |
|---|
| End bp | 2028118 |
|---|
| Gene Length | 2052 bp |
|---|
| Protein Length | 683 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643698826 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_002355452 |
|---|
| Protein GI | 217970218 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0894155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTCGTC TGCGCCCGCT CGCGGTGGCC GTCCTCGGCC TGTCCGCCTT CCCCGTTTCC
AGCCTCGTCC ATGCCGAGAC CCTGCTCGGC GCCCAGACCG TCACCGCCAA GGGCTACGCC
GCCGACACCC TGGAGACCCC GCAGGCGGTC GAGATCCTGC AGGCGCCGGC GGCCGGCGGC
ACGGTCGCGG GCGCGCTGCT GCGCGGCAAG CCCGGCCTGG CGGCGCAGTC GGACGGTGCC
TGGGGGCAGA ACCCGGTGCT GCGCGGGCTC AAGAAGGAAA GCGTGGTGGT GATGGTCGAC
GGCGTGCGCA TGAACTCGGC GCAGCCGCAG GGCGCGATCG CCTCCTTCCT CGACCTCGGC
CTGCTCGAGC GCGCCGAGGT GGTCAAGGGG CCGGGCTCGG TGCTGTACGG CAGCGGCGCG
ATGGGCGGGG TGGTCAACCT GATCACGCCC GATGTCGGCT TCAGCGCCGA AGAGGCGGTG
GGCGGGCGCG TCGGCGCGCG CTTCTCCAGC GTGGACAAGG GCGTCGCCGG TGCCGCGCTG
CTGACGCGCT CGAGCGCGCA CGGCGCGCTG GTGCTGGGCG TGGCCGGGCG TGACGTGGAC
GACTACCGCA GCCCGGACGG CCGCGAGGAT CGCACCGGTT ACCAGTCCGA CACGCTGCTG
GCAAAGTACA AGCACAAGCT GAGCGAGGAC CTGACCCTGC GGGTGAACCT GCAGCGGCAT
GAGGACGAGG ATGTGTGGTA TCCGGGATCG GCGCGCACCG GCGCCGGAAT CCCCAAGCCG
CTCGGCACCG CGACCATCCA TTCTCCCGAG CAGCGCCGCG AGCTCTACGA GCTTGGCGTG
GACGCGAAGC TGGGCGAGGG CACGCTGTCG GCCGAGCTCT ACCGTCAGGA AGTGTTCCGC
CAGATCCGCG CGTTCTCGTC GGCCAAGCAG CGCGACTATG TGCGTAACGA CGTCCGCTTC
GTCACCGATG GCGCGAAGGC GAAGTACCTG TTCCCGTTCG GCGCCGACCA CCTGCTGACC
GTGGGTGCCG ACCTCTGGCG CATGCGCGGC GATCCGGAGC GCTACATCGA CAACAATCCG
CCGGCCTTCG ACAACAACCT GCGCAACGAT CCTTTCGACA AGGGCGAGAT CGAGTCGGCG
GGCGTCTTCG TGCAGGATGA GTTCAGTCTC GGCGATACCC GGATCGTCGC TGGGGCGCGT
TTCGATCGCG TCACCGGTGA CGCTGAACGC AAGGGCATGA CGCAGACCAC CGGGCTGGAG
AACGCCGACA ACAACCTGTC GTGGTCGCTC GGTGCGATCC AGCCGCTGAG CGAGCGCCTG
AGCGCCTACG CCAACCTCGG CCGCGCCTAC CGCGCGGCGG ACATGCGAGA GCGCTTCGAG
GACTCGGCGC GCGGCGACGG CTACTTCCAT GTCGGCAACC CGCAGCTCGA CCCGGAGGTG
TCGACCAGTC TCGAACTCGG CCTGAAGCGG GGCGGCGCCG GCCTGCGGTA CCAGCTTGCC
GCCTTCTATA CGCGCATCGA CGACTACATC GCCGGCCGTG TCACCGGGGC CGTGCATCCG
CAGAACGGCC TGCCCTTCAA GCTCACCGAG AACCTCGACA AGGTCACGAT CTACGGCATC
GAGGGCAGCG CCAGCATGCC GGTCGGCGCC TTCGTCGCCG ACGCGGGCTT CACCTGGCTG
CGCGGCGAGA ACCATCAGGA CGACGAGCCG CTGTTCCAGA TGCCTGCGCC CGAGCTGACC
CTGGGGCTTG GCCAGGCGGC CGAACGTGGC TTCTGGTGGC GCGCGCAATT GCGCGCGGTC
GCCGAGCAGG ACCGCATCGC GACCCGGTTC TCCAACGGCA CCGAAAACCC CACCGCCGGC
TTCGTCACCG CCGACGCCGA GTTCGGCTGG CGCTTCGGCA AGCTCGGCGC CTTCGAATCC
GCCGGGCTGG CCGTGCAGCT GAGCAACCTC GCCGACAAGC GCTATCACGA GCACCAGACC
GAGGGCGTGT CCGGCAACGA ACTCGCCGCG CCCGGCCGTG GCGTGGCGCT CAGCCTGAAC
GGGAGCTTCT GA
|
|---|
| Protein sequence | MLRLRPLAVA VLGLSAFPVS SLVHAETLLG AQTVTAKGYA ADTLETPQAV EILQAPAAGG
TVAGALLRGK PGLAAQSDGA WGQNPVLRGL KKESVVVMVD GVRMNSAQPQ GAIASFLDLG
LLERAEVVKG PGSVLYGSGA MGGVVNLITP DVGFSAEEAV GGRVGARFSS VDKGVAGAAL
LTRSSAHGAL VLGVAGRDVD DYRSPDGRED RTGYQSDTLL AKYKHKLSED LTLRVNLQRH
EDEDVWYPGS ARTGAGIPKP LGTATIHSPE QRRELYELGV DAKLGEGTLS AELYRQEVFR
QIRAFSSAKQ RDYVRNDVRF VTDGAKAKYL FPFGADHLLT VGADLWRMRG DPERYIDNNP
PAFDNNLRND PFDKGEIESA GVFVQDEFSL GDTRIVAGAR FDRVTGDAER KGMTQTTGLE
NADNNLSWSL GAIQPLSERL SAYANLGRAY RAADMRERFE DSARGDGYFH VGNPQLDPEV
STSLELGLKR GGAGLRYQLA AFYTRIDDYI AGRVTGAVHP QNGLPFKLTE NLDKVTIYGI
EGSASMPVGA FVADAGFTWL RGENHQDDEP LFQMPAPELT LGLGQAAERG FWWRAQLRAV
AEQDRIATRF SNGTENPTAG FVTADAEFGW RFGKLGAFES AGLAVQLSNL ADKRYHEHQT
EGVSGNELAA PGRGVALSLN GSF
|
|---|
| |