Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1601 |
Symbol | |
ID | 7084810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 1795055 |
End bp | 1796020 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643698620 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002355252 |
Protein GI | 217970018 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAGA CAAGTTGCCC GGTCCCGGTC GGCAGGATTG CGCGGCCACG CCTCCGGCGC CTTCCACGGC TGCTGGGGTT GGCGGTCGCG CTGGCCTCGA CCGTTTGCGC CGCGGCCGGT GAGGGCGCGT TCGAGCGTGC GCTCGCCGAG CAGGCCCGCT ATCTCGCCAC CGAGGCGCTG GCCTACGAAC ACGGCGAGGG CGTGCCGCGC GACCAGTCGT ATGCGGCCTT GCTCTACTGC GAGTCCGCGC GCCTCGGCGA CAGCGAGGGC ATGTACGCGC TTGGCTGGAT GTACGCCAAC GGCCGTGGCG TCGAGCGCAA CGACGCCTAC GCCGGCACGC TCTTCGCGAT GGCGGCCGCG AAAGGCGATG AACATGCGCA GCGCATGTTG CGGTACACCG GCGAATACAC CGGTGACGTA CCGGACTGCC TGCACACGCC TTCGACCCAG ATCGTGCAGC GCTGGCCGGT CGAGGCGCTG ATCGCGCGCC TGCCGCCGGT GCGTCAGGCG GTTGCGCGCA TGCTCGCCGA GCTGGCCCCC AAGTACGGCG TGCGCCCCGA GTTCGCCCTC GCGATCGGGC TGACCGAGTC GGCCCTGAAC CCCGACGCGC TCTCGCCCAA GAACGCGATG GGCGTCATGC AGCTCATCCC CGCCACGGCC GAGCGCTTCA ATGTCGGCAA GCCCTACGAT CCCGAGCAGA ACATCCGTGG CGGCCTCGCC TACCTGCGCT GGCTGCTGGC CTATTTCGAG GGCGACATCG CGCTCGCCGC AGCGGCCTAC AACGCCGGAG AGGGTGCGGT GGACCGCTAT CGGGGGGTGC CGCCGTATCG CGAGACGCGT GCCTACGTGG AGCGCATCCT GCGTCACGTC GGTCAGGATC GCCATCCCTA CGACAGCCGC GTGGTCCCCC CCAGCCCGAT GTTGCGCAAG CTCCGCCTCG CTCTGGAAGA GGAACACGAG TCATGA
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Protein sequence | MDKTSCPVPV GRIARPRLRR LPRLLGLAVA LASTVCAAAG EGAFERALAE QARYLATEAL AYEHGEGVPR DQSYAALLYC ESARLGDSEG MYALGWMYAN GRGVERNDAY AGTLFAMAAA KGDEHAQRML RYTGEYTGDV PDCLHTPSTQ IVQRWPVEAL IARLPPVRQA VARMLAELAP KYGVRPEFAL AIGLTESALN PDALSPKNAM GVMQLIPATA ERFNVGKPYD PEQNIRGGLA YLRWLLAYFE GDIALAAAAY NAGEGAVDRY RGVPPYRETR AYVERILRHV GQDRHPYDSR VVPPSPMLRK LRLALEEEHE S
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