Gene Tmz1t_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1448 
Symbol 
ID7083531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp1614481 
End bp1615140 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID643698466 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002355103 
Protein GI217969869 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.388698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTGT CCGTCATCGA CTGGAGCGAC ATCTGGATCG CGACCTGGGA GACCCTGGTC 
ATGACCGGGG TGTCGCTGCT CTTCACCATC CTGCTCGGCC TGCCGCTGGG CATCCTGCTG 
TTCGTCACCG CCAGGCGCCA GCTGCTGGAG CAGGGCTTCG TCTATACGGT GCTGTCCTTC 
GTGGTCAACG TGCTGCGCTC GGTGCCCTTC CTGATCCTCT TGATCGTGAT GATCCCGGTC 
ACGGTGATCC TGATCGGCAC CTCGCTCGGG GTCGAGGGCG CGATCCCGCC GCTGGTGGTG 
GGCACCGCGC CCTTCTTCGC GCGCCTGGTC GAGAACGTGC TGCGCGAGGT CGACCGCGGC 
GTCATCGAGG CCTGCCAGGC GATGGGCATC CGCACGCATC GCATCATCTT CGGCGCGCTG 
CTGCCCGAGG CCCTGCCCGG GCTGATCGCC GCGGTCACCG TGACGGCGAT CACCTTGATG 
TCCTATGCTG CGATGTCCGG CGTGATCGGC GGCGGCGGCC TCGGCGACCT CGCGATCCGT 
TTCGGCTATC AGCGCTTCCA GACCGAGGTG ATGGTGATCA CCGTCGCCCT GCTGGTCGTG 
CTCGTCCAGA TCATCCAGTA CTCGGGCGAC CGCCTGGTGC TGTATTTCAC CCGCAAGTGA
 
Protein sequence
MDLSVIDWSD IWIATWETLV MTGVSLLFTI LLGLPLGILL FVTARRQLLE QGFVYTVLSF 
VVNVLRSVPF LILLIVMIPV TVILIGTSLG VEGAIPPLVV GTAPFFARLV ENVLREVDRG 
VIEACQAMGI RTHRIIFGAL LPEALPGLIA AVTVTAITLM SYAAMSGVIG GGGLGDLAIR 
FGYQRFQTEV MVITVALLVV LVQIIQYSGD RLVLYFTRK