| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1226 |
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| Symbol | |
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| ID | 7083886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1360605 |
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| End bp | 1361270 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643698242 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002354881 |
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| Protein GI | 217969647 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.793802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGCC TGCCCGCCCC GCTCCGCCAG CTCGCCGCCG CGTGTGCGCT CGCGCTCGCG
GCCGGTAGCG CGCAGGCCGG CGCGCAGCAG TACGAGCCCA TGGCGGCGAG CGTGCGCGCC
GCGCTGCACG CCGCGGTCAG CGACGCCGTG GCACCGACGC TGCCGATCCC CGACGCCGGT
GAACGTGCAC AGTGGCTCGC CGAGATGTCG CGCCGGCTGG CCAGGCGCAT CCCGGACGAG
GCCTATCGCA GGGAGCTCCT CACCAGCATC CACTACGAGG CCACCCGCGC CGGACTCGAC
CCGCAGATGG TGCTCGGTCT GATCCAGGTC GAGAGCGCCT TCCGCAAGTA CGCGATCTCC
TCGGCGGGCG CGCGCGGCTA CATGCAGGTG ATGCCGTTCT GGATCAAGGT CATCGGCCGC
GAGGACGACA ACCTCTTCCA CATGCGCACC AACCTGCGCT ACGGCTGCAC CATCCTGCGC
CACTACCTCG ACATCGAGAA AGGCAACCTC TTCCGTGCGC TGGGACGCTA CAACGGCAGC
CTGGGCAAGC CGGACTACCC CAACCTGGTC CGCGCCGCCT GGGAAAGGCA CTGGACCTGG
ACGCCGCAGC AGCTTGCCTC CGCGGGCGCT TCCCAGCCGC AAAGCGGCGC CACGACGGCG
CGCTGA
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| Protein sequence | MRRLPAPLRQ LAAACALALA AGSAQAGAQQ YEPMAASVRA ALHAAVSDAV APTLPIPDAG
ERAQWLAEMS RRLARRIPDE AYRRELLTSI HYEATRAGLD PQMVLGLIQV ESAFRKYAIS
SAGARGYMQV MPFWIKVIGR EDDNLFHMRT NLRYGCTILR HYLDIEKGNL FRALGRYNGS
LGKPDYPNLV RAAWERHWTW TPQQLASAGA SQPQSGATTA R
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