| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1038 |
|---|
| Symbol | |
|---|
| ID | 7084022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 1139950 |
|---|
| End bp | 1141116 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643698056 |
|---|
| Product | cytochrome c oxidase, subunit II |
|---|
| Protein accession | YP_002354696 |
|---|
| Protein GI | 217969462 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
|---|
| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGACACC ATTCATCCGG GGCGAGGCCC GGGACGCTCC CTCCCGGCCG TGCCCTGGTC
GCGGCCTCGA TGCTGGTGGC CGGCGTTCCT GCGGGCGCGC AGGACATGCG CCTGAACATG
ACGCGCGGCG CCACCGAGCT CAGCCGGCAG GTCTTCGACC TGCACATGAC CATCTTCTAC
ATCTGCGTCG CCATCGCGCT GGTCGTGTTC GGCCTGATGT TCTGGTCCAT CGTGCGTCAC
CGCAAGGCCA GGGGGGCAGT GCCGGCGCAG TTCCATGGCA GCCTGAAGGT CGAGATCCTG
TGGACCGCGA TCCCGGTTCT GATCCTCGTG GCGATGGCGG TTCCGGCCAC CCGCACGCTG
ATCGCGATGG AAGACACTTC CGCATCCGAG CTCACCGTGC TGGTGACCGG TTCGCAGTGG
AAGTGGCACT ACAAGTACCT CGACTACCCG ATCGAGTTCT ACTCGGTGCT CGCCACGCCG
CGCGCGCAGA TCGCCAACGC GGCGGACAAG ACGCCGGACT ACCTGAGGGC GGTGGACAAG
CCGCTGGTGC TGCCCAGTGG CAAGAAGGTG CGCTTCCTGC TGACCGCCGA CGACGTCATC
CACTCGTGGT GGGTACCCGA CTTCGCGATC AAGAAGGACG CGGTGCCCGG CTTCATCAAC
GAGACCTGGG CGCGCATCGA CAAGCCCGGC TTGTACTACG GCAAGTGCGC CGAACTGTGC
GGGCGCGACC ACGGCTTCAT GCCGGTGGCG GTCGAGGTGA AGACGCCCGC GGACTTCGAG
GCCTGGGCGG CGCAGCAGGT GGCCGCCGCC GAGCAGGCCA AGGCCGAGGC CGAGAGCGCC
GGACCGATGA GCATGGACGA ACAGATGGCG CTCGGCCGGC AGGTCTATGA GCGGGCCTGT
GTCGCCTGCC ACCAGGCCGG CGGCGAGGGC CTGCCCGGCG TGTTCCCGGC ATTGAAGGGC
AGCGCGATCG CCACCGGCGA GCCGGCGGCC CACCTCCACA TCGTGCTGTT CGGCAAGACC
GGCACCGCGA TGCAGGCTTT CGGCAAGCAG CTCGGTGTCA AGGAGCTGGC CGCGGTCATC
ACGTACGAGC GCAACGCCTG GGGCAACGCC AAGGGCGACC AGGTGCAGCC GGCCGACATC
GCGGCCGCGA TCGCGAAGGG GGAGTGA
|
|---|
| Protein sequence | MRHHSSGARP GTLPPGRALV AASMLVAGVP AGAQDMRLNM TRGATELSRQ VFDLHMTIFY
ICVAIALVVF GLMFWSIVRH RKARGAVPAQ FHGSLKVEIL WTAIPVLILV AMAVPATRTL
IAMEDTSASE LTVLVTGSQW KWHYKYLDYP IEFYSVLATP RAQIANAADK TPDYLRAVDK
PLVLPSGKKV RFLLTADDVI HSWWVPDFAI KKDAVPGFIN ETWARIDKPG LYYGKCAELC
GRDHGFMPVA VEVKTPADFE AWAAQQVAAA EQAKAEAESA GPMSMDEQMA LGRQVYERAC
VACHQAGGEG LPGVFPALKG SAIATGEPAA HLHIVLFGKT GTAMQAFGKQ LGVKELAAVI
TYERNAWGNA KGDQVQPADI AAAIAKGE
|
|---|
| |