Gene Tmz1t_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0930 
Symbol 
ID7085033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp1021224 
End bp1021850 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID643697952 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002354592 
Protein GI217969358 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATCGA GTGACATCAC CGCCGAAATT CGCATGGCCG TCCTCGGCGA ATGGGTGCCT 
CCCCAGCTCG CCGACGTGCT CGCCCTGCAG CGTGCCGAAG AGCCGGAGAC CCATGCCGTC 
CTGGCCGGGT GGACAGATCC CGGTCGAGGC GCGGAGCTGC CGGGCGACGG CTTCGACTTC 
GCCTTGTCTG CGGTTGCCCG GCAGTGGCCT GGCTGGGTAT GCGAACCGCT GTGGCATGAC 
ACGCTGGCGG TCGCCGTGGC CAAGCGCTCC CACCTGCTGG CCTACCGTGA AGTGCCGTGC 
CAGGAAGTGC TCAAGCAGCC CTTGATCTGC TCGCAATCCA CGGCTCATGA ACCATGGCGC 
ATGACCGCAC AGCGCGTGTT CGAGAACGCG CTGCAGGAGC GGGAGCAAAC GGTGGAGACA 
TTCGATGTGG CGATGACGCT GGTTGCCGCC GGGTACGGGA TCGCCATTGC GCCGTCGGTG 
AAGCTGGCCG GCTACGCGAA CCGCGGCATC GCCGCGCGAC CCTTGGCTGG CGCACCAACC 
GTCGTGATGG CTTATCTCCT GTATCCACGT GCGCGCCTGA CCGAACCCGT GGCCAGGTTC 
ATTCAACGCG CTCGCAGCGT GTCCTGA
 
Protein sequence
MESSDITAEI RMAVLGEWVP PQLADVLALQ RAEEPETHAV LAGWTDPGRG AELPGDGFDF 
ALSAVARQWP GWVCEPLWHD TLAVAVAKRS HLLAYREVPC QEVLKQPLIC SQSTAHEPWR 
MTAQRVFENA LQEREQTVET FDVAMTLVAA GYGIAIAPSV KLAGYANRGI AARPLAGAPT 
VVMAYLLYPR ARLTEPVARF IQRARSVS