| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0923 |
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| Symbol | |
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| ID | 7085026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 1012085 |
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| End bp | 1014469 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643697946 |
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| Product | putative phytochrome sensor protein |
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| Protein accession | YP_002354586 |
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| Protein GI | 217969352 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCT CCGTGTCCAG CGCCGTCACG CACCGTCTCG CCTTCTTCAA GGGCTTGCAG
ACGCTGACCA ACCGCATCCA TGCGAGCAAG GACACCGACG AGATCATGCT CGAGCTCGCG
CCCGAGCTGT GCTCGCTGTT CGAGGCCGAG CGCTTCACCA TCTACGCGCT GGAGGAGGGC
GGGGCCTCGA TCGTCACCCG GGTCAAGACC GGGCTGAGCG GGGTGCAGAG CATCCGCCTG
CCGATCGGCG AGAACAGCAT CGCCGGCTTC GTCGCGCTCA GCGGCCAACT GGTCAATATC
CGCGACGTGT ACGACGACGA GGAGCTGCGC CGCATCTCGC CGCACCTCGC GCTGCGCCGC
GAGGTCGACG CCAGCACCGG CTTCCACTCG CGCCAGATGC TGGTCGCGCC CATCCGCGAT
CCCGACACCG GCAGCCTGCT CGGGGTCGTG CAGCTCATCA ACACGCTCAA CCGCGAACCC
TTCTCCAAGA TGACCGAGGA GGGGCTGATG GGGCTCGCAC AGACGCTCGG CGTTGCCTTC
CTGCGCCACA ACCGCCAGGC CGGGCGCCTG CGTTCGCGCT TCGAGGCGCT GGTGGTCGAT
GGCCGCATCA CCGCCGAGGA GTTCGCCGAC GCCACCCGCG AGGCGCGCGA GAGCGGGGCG
GGCACCGAGA ACCTGCTGAT CGAGCAGCTC GGCCTCAGCC ACGCCGAACT CGGCGCAGCG
GCCTCGCGCT ATTTCGGCGT GCCCTATCAG CCCTTCGTCG CCAACCACGT CAAGCCGATG
GACCTGCTGC GCAACATCAA GCGCGAGTTC GTCGAGCGCA GCCTGTGGCT GCCCTGGGAG
GAGAACCCCG AGGGCGTGGT GATCCTGTGC GTCGACCCCG AGCAGGTGCG CAGCTCGGGC
GTGGCGCAGA ACGTGCTGCC GAAGAAGCGG CTGACCTACC GCGTCACCAC CCAGCGCGAC
TTCGAGCTGA CGGTCGAGCA GTTCTTCGGT GTGACCCTGG ACGACGCCTC GGTCTCGGAC
CTGCTGTCCG GTCTCGACGA TCACGAGGAG GACGCCCTCT CGCTCCGGGA CGAGGTCAAC
GCCGCCGCCG ACAACGAGCT CGTCAAGCTG GTCAACAAGA TCATCATCGA CGCCTATCGT
CAGGGCGCCT CCGACATCCA CATCGAGCCC CGCCCGGGCA AGGAGAAGAC CCAGATCCGC
TTCCGCAAGG ACGGCTCGCT GGTGCCCTAC ATCGAGATCC CGGCAAGCTA CCGCAACCCG
CTCGTCACCC GCATCAAGAT CATGTGCGAC CTCGACATCT CCGAGCGCCG CAAGCCGCAG
GACGGCAAGA TCCGCTTCCG CAAGTTCGCC CCGGTCGACC TCGAGCTGCG CGTGGCCACG
CTGCCCACCC AGGGCGGCAT GGAGGACGTG GTGATGCGCC TGCTCGCGCA CAGCGAGCCG
ATCCCGATCG ACCAGCTCGG CCTGCTGCCC TTCAATCTCG AGCGCCTCAA GAGCGCGATC
GCCAAGCCCT ACGGCATCTT CTTCGTGTGC GGCCCCACCG GCTCGGGCAA GACCACCACG
CTGCACTCCA TCCTGAGCTA CATCAACACC CCGGATACCA AGATCTGGAC GGTCGAGGAC
CCGGTCGAGA TCACCCAGAA GGGCCTGCGC CAGGTGCAGG TCAACCGCAA GGCCGGCATC
GACTTCGCCA CCATGATGCG CGCCTTCCTG CGCGCCGACC CGGACGTGAT CATGGTCGGC
GAGATGCGCG ACCACGAGAC CGTCTCGGTC GGCATCGAGG CCTCGCTGAC CGGCCACCTG
GTGTTCTCGA CCCTGCACAC CAACAGCGCG CCCGAATCGG TCGTGCGCCT GCTCGACATG
GGCATGGACC CGTTCAACTT CGCCGACGCG CTGCTCGGCG TGCTCGCCCA GCGCCTGGCC
AAGCGCCTGT GCCTGAAGTG CCGGGTACCC TACCGCGTCG GCGAGGACGA GCTCGCCAGC
CTGCTCGACG AATATTGCGA GGACATGCAC CTGACCCCGG ACTTCGCCGC CGACCCGAAG
ACCGCCCGCG AGCGCGTGCT GGGGCGCTGG CGCGAGGCCT TCGGCGACAA GGACGGCGGC
TTCCGGCTCT ACCGCGCGGT CGGCTGCGAG CACTGCAACC AGGGCTACAA GGGGCGGGTA
GGCCTGCACG AGCTGATGCT CGGCTCCGAC GCGATCAAGC GCCAGATCCA GTCGCGCGGC
CGCGTCGACC AGATCCTCGG CCAGGCGCTC GCCGAAGGCA TGCGCACGCT GCGCCAGGAC
GGCATCGAGA AGGTGCTCGC CCGGCATCAC CGACATGAAG CAGGTGCGCA AGGTCTGCGT
GCGCTGAGCG CGGCAGGGGC GGCCGATCGG CGGGGCGCGG GTTAG
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| Protein sequence | MNTSVSSAVT HRLAFFKGLQ TLTNRIHASK DTDEIMLELA PELCSLFEAE RFTIYALEEG
GASIVTRVKT GLSGVQSIRL PIGENSIAGF VALSGQLVNI RDVYDDEELR RISPHLALRR
EVDASTGFHS RQMLVAPIRD PDTGSLLGVV QLINTLNREP FSKMTEEGLM GLAQTLGVAF
LRHNRQAGRL RSRFEALVVD GRITAEEFAD ATREARESGA GTENLLIEQL GLSHAELGAA
ASRYFGVPYQ PFVANHVKPM DLLRNIKREF VERSLWLPWE ENPEGVVILC VDPEQVRSSG
VAQNVLPKKR LTYRVTTQRD FELTVEQFFG VTLDDASVSD LLSGLDDHEE DALSLRDEVN
AAADNELVKL VNKIIIDAYR QGASDIHIEP RPGKEKTQIR FRKDGSLVPY IEIPASYRNP
LVTRIKIMCD LDISERRKPQ DGKIRFRKFA PVDLELRVAT LPTQGGMEDV VMRLLAHSEP
IPIDQLGLLP FNLERLKSAI AKPYGIFFVC GPTGSGKTTT LHSILSYINT PDTKIWTVED
PVEITQKGLR QVQVNRKAGI DFATMMRAFL RADPDVIMVG EMRDHETVSV GIEASLTGHL
VFSTLHTNSA PESVVRLLDM GMDPFNFADA LLGVLAQRLA KRLCLKCRVP YRVGEDELAS
LLDEYCEDMH LTPDFAADPK TARERVLGRW REAFGDKDGG FRLYRAVGCE HCNQGYKGRV
GLHELMLGSD AIKRQIQSRG RVDQILGQAL AEGMRTLRQD GIEKVLARHH RHEAGAQGLR
ALSAAGAADR RGAG
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