Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0878 |
Symbol | |
ID | 7084736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 970337 |
End bp | 970918 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643697901 |
Product | protein of unknown function DUF1239 |
Protein accession | YP_002354541 |
Protein GI | 217969307 |
COG category | [S] Function unknown |
COG ID | [COG3117] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000052422 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGGTCG ACACCTGGCG CCTGTATCCG GTCTTCGCCC TCGCGCTGCT GGCGGGCGGA TCGGTGTGGC TCGAGCGCAT CACCCGGATC GACGATCCGG CGGCGAGCAT CGAGCAGACC GGTCCGGACT TCATCGCCCA CGACACCCGC GTGGTCGGCT TCGGCGCCGA CGGTGCGCAG CGCTACGAGC TCGTGGCCGA ACGCCTGGAG CATTTCCCCG TCGGCGACAT CACCCGGCTG CACACGCCCC GCCTGCAGCT GCACGGCGCG GAAGGCACGA CCACGATCAC CGCGCGCGCG GCCGACGTCT CGCCCGGTGG CGAGCAGGTG GACCTCACCG GCGAAGTGCG CGTGCGGCGT CCGGGCCAGG CCGGGGCGCT GCCGCTCGCG CTCGACTCGG AGACGCTCGC GGTGTGGCCG GACGCCCAGC GCGCACGCAC CGACTCGCCG GTCCTGATGA CCCGCGGCGC CGGACGCGCG ACGGCCAAGG GCATGCGTGC GGACAACCTG TTCGGCACGC TCGAACTCAT CGGCGAGGTC AGCACGACGA TGCCACCCCG CCGCCAAGGA TCCCCCTCAT GA
|
Protein sequence | MRVDTWRLYP VFALALLAGG SVWLERITRI DDPAASIEQT GPDFIAHDTR VVGFGADGAQ RYELVAERLE HFPVGDITRL HTPRLQLHGA EGTTTITARA ADVSPGGEQV DLTGEVRVRR PGQAGALPLA LDSETLAVWP DAQRARTDSP VLMTRGAGRA TAKGMRADNL FGTLELIGEV STTMPPRRQG SPS
|
| |