Gene Tmz1t_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0541 
Symbol 
ID7085155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp610043 
End bp610828 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID643697568 
Producttranscriptional regulator, IclR family 
Protein accessionYP_002354210 
Protein GI217968976 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.765211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCCT CGAAATCACG CGCCCTGAAC GCCGATGCCC CCACGAAGGG GCAGACCATG 
CTGCGGGGAC TCGACATTCT CGAGGCGATC GCGGACGGTG CGCGCACGGT CGCCGAAATC
GCCGCACAGA CCGGCCTCAG CCTCAGCACC ACCCATCGTC TCGCTTCGTC CCTGGCCGAT
CGCAACTACC TCAAGTTCGA GCCGCGCAAG GGCTACAGCC TCGGCCAGAA GCTCATCGAG
CTGGGCTTTG CGGGCTATCG CGAGGCCGAT CTTCGCAAGC TGGCCCGGCC TTACCTGGAG
GAACTCGCCA GCCGGACGTA CGACACCATC CATCTTGCCG CGCTGGTCCA CGATGAGGTG
ACCTACCTCG ACAAGATCGC GGGCAAGCGC CCGGTGGAGA TCAGTTCCCG CGTCGGTGGG
CGCAAGCCGG TGTGCTCCAC CGGCGTGGGC AAGGCCCTGA TCCTCGATCG CAGTGAAGAT
TTCTGGCGGC ACTGCTATCG CAAGGAGTTC GGCGGCGAGG CCGACCCCGA CGCCATGGCC
GAATGGATGG CCAGGATGCG CAGCTACGTC GGGCTCGATT ACGCCGAGGA TTTCGGCGAG
AACGAAGGCG CCATCCGCTG CGTCGCCGCA CCCATCCGCG ATGGCAGCCA GCGTATCGTC
GCGGCGGTCA GCGTTTCATC GGCCCGCGAG TACATGGACC GCCAGCGCAT GCAGGGACTG
ATCAACGAAG TTCGCAACAC CGCACGCGCC ATCAGCGCGG AGCTCGGCGC ACCGGGCAAG
GACTGA
 
Protein sequence
MTSSKSRALN ADAPTKGQTM LRGLDILEAI ADGARTVAEI AAQTGLSLST THRLASSLAD 
RNYLKFEPRK GYSLGQKLIE LGFAGYREAD LRKLARPYLE ELASRTYDTI HLAALVHDEV
TYLDKIAGKR PVEISSRVGG RKPVCSTGVG KALILDRSED FWRHCYRKEF GGEADPDAMA
EWMARMRSYV GLDYAEDFGE NEGAIRCVAA PIRDGSQRIV AAVSVSSARE YMDRQRMQGL
INEVRNTARA ISAELGAPGK D