| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1715 |
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| Symbol | |
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| ID | 7082235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dictyoglomus turgidum DSM 6724 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011661 |
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| Strand | - |
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| Start bp | 1733040 |
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| End bp | 1736153 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643458825 |
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| Product | Endo-1,4-beta-xylanase |
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| Protein accession | YP_002353601 |
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| Protein GI | 217968095 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000895355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAAA AGAGATTCTC TCTTCTATTT TTGATTACAT TCCTACTAAT CCTCTCTATA
ACCATTGGTT CTGAAGATCT TACTTTATAT TTTAGTTTTG AAAATGGTTC AGAAGAGGGA
TTCCTGGGGA CCAGTGAGAG GGTAAAACTA AGTATTGTAG AAGATGTAGT CTTAGATGGG
AAATATGCAT TAAAGGTACA TAATAGACTC TCTTCTTGGG ACGGATGTAG GGTAAGCTTG
ACTTATAATT TATTACCTGA GATGAATTAT TTAGTAAGTG CTTTTGTATA CCATACTTCT
GATAAACCTC AGCCTTTTCA AATTGTTGCT CGTATTAAAG ATATTGTAGG TGAAAGATTT
GAACTTATTG GGGAAACCAT AGCAATGCCT AAGGTATGGA AGGAGATAAA AGGAAATTTT
AAGTTTAATT ATTCTGTTTA TTTAGAGGCA TTAGATTTAA TGATTGTATC TCCTAATGAA
TCTGGATTTG ATTTTTATGT GGATAAGATA CAAGTATTGG GTCCTAATAA AGTTTCTTCC
CCAGGATCTG TGGTTAACTC AACTTTTGAA AGTGGTACTG TGGAAAATTG GGAAGCAAGA
GGAGATGGGG TAAAAATCTT AGTTAGGGAT AATGTAGCCA AAACTGGAAA GTACTCTCTT
TTTGTAACGG GAAGAACAAG AAGTTGGCAT GGTGCTCAAA TAAATCTTTC AAAAATTTTA
GAAACGGGAA AGAGCTATGA TATATCAGTT TGGGTGTATC AAAGTTCTGG TGAAACTCAA
AAAATAACTC TTACAATGCA GAGGAAATTT GACATAGATG AGAAAACAAG ATATGAAACC
ATAGTCTGGC AAAAGAGTAT TCCAGATAAG ACTTGGGTTG AGCTTTCAGG ATCCTACAAT
GTTCCACTCA ATGTAAAGAT TGAAGAGTTA ATACTTTATG TGGAATCTCC TAATACCAAT
TTAGAATTCT ATGTGGATGA TGTTAAGGTA ACCGATAGGA CCTTAGTTTT GGGTCAACCA
GAATGGGAAA TCCCATCCTT AGCTGAGATG TTCAAAGGGT ATTTTAAAAT TGGAGTTGCT
ATTCCTTTTA AAGTTTTGAT AAATCCTGTT GAGGCTAAAA TGGTGGTTAA ACATTTTAAT
AGCATTACTT CGGAAAACGA AATGAAGCCA GAATCTCTTC AACCAAGGGA AGGAGAGTTT
GATTTTAGTA AAGCAGATGC TTATGTAAAG TTTGCCGAAG AAAATGGTTT GGTAGTGAGA
GGACACACTC TTGTATGGCA TAGTCAGACT CCTAATTGGT TCTTCGTAGA TAAAGACGGA
AAACCTGCTT CTAAGGAATT ACTCTTAAAG AGATTGGAAA ATCATATTAA AACAGTGGTG
GGAAGATACA AGGGAAGGGT TTATGCTTGG GATGTGGTAA ATGAAGCTAT AGATGAAGCT
CAACCTGATG GTTTTAGAAG AAGTAAGTGG TTTGAAATAT TAGGTCCCGA ATATATAGAG
AAAGCCTTCA TATGGGCTCA TGAAGCAGAT CCAAATGCAA AGCTTTTCTA TAATGATTAT
AATACTGAGA TTCCTGCTAA GAGGGAATTT ATATATAAAC TCGTGAAATC TCTTAAAGAA
AAAGGTGTTC CGATTCATGG GGTTGGATTA CAATGTCACA TAAATATCTC TTGGCCAGAG
ATTGAGGAGA TAGAAAATAC CATAAAACTG TTTAGTACTA TTCCAGGAAT AGAAATTCAT
ATTACAGAGC TTGATATGAG TGTCTATACC CAGGCTGGAG AAGAGTATAA AACTCTGCCA
AGAGATGTGG CTGTAAGACA AGGGTATAGG TATAGAAAGT TATTCGATAT GCTTAAAAAA
TATAAAAACG TAGTGACTAA TGTAACCTTT TGGGGATTAA AAGACGATTA TTCTTGGTTA
AATCAGAGGG GAAGATTCAA TTATCCTCTA TTGTTTGATA AAGATTATCA GGCAAAATTG
GCTTATTGGG CTTTGGTGTC TCCTAATGTT TTGCCTCCTC TTATTCAAAG TGCTAAGATG
GCAAGTGGAC AGGCTGTGGT GGATGGGATA GAAGATAAAA GCTATAAATC TGCTATACCA
GTAATTATAA ATGATGGAGA AAGAGATGTA GCTGTGGTTA AACCTATATG GTATATGAGT
AAGATATTTG TTTTTGCAGA GGTATTTGAT GGAAGAAAAG ATGATACAGA TTGTTTAACT
GTGTTTGTGG ACCAAAACAA TGCAAAATCC CCATATCTTC AAAGTGATGA TGTATATTTT
AAGTTCTATA GAAATGGAAA AATAGAAAGT AATTTTGCTC CCATGTTAAA GAATTATACG
ATAAGAGAAA AAGAAACAGG ATATACAATT GAATGCGAAA TCCAGATATA TGCTATTCCA
ATAGGAAAAG GGAGTAAAAT AGGAATGGAC TTTTCAATGA TAGATGGAGA AAAGGTTGTA
AGTTGGAGTG ATCACTCTAA TCAGCAGTTG TTAAGCACTA TAAGGTATGG TACCTTAGAA
CTTGAAGAAG CAGTTAAGTT GGCCCAAGCT AAGAAAGGAA GCCCTGTAGT TGATGCCCTT
ATGGATGACC TCTATAAGAG TGTTGATCCC ATAGAAACAG AAACTGCAGT AATGGGTAAA
ATAGAGAAAG TAAAGGGCAA AGCTTGGATA TTGTGGGATG AGGATCATAT ATATTTATAC
GCAGAAGTAA GCGATGATGA TCTTGATGAT ACAGCAACAA ATCCGTGGGA ACAGGATTCT
TTTGAGATCT TTATAGATGA GAATAATGCA AAGACTGCAA GTTATCAGGC AGATGATGCC
CAATATAGAG TTAATTTTAA GAATGTACAA ACTTTTGGTA CTGGAGCCAA TGCTGAGTAT
ATAAACTCTG CTACAAGGTT ACTAAGGGAT GGAGAAAAAG TTATAGGCTA TGCTGTAGAA
GTAGCAATAA AGATGAAAAC AAAAAGACTT AAGGTGGGAG AAGTAATAGG ATTTGATATA
CAGGTGAACA ATGCTTCAAA GGGGATGAGG ATAGGAATCT ACACATGGAA TGATCCAGTG
GGAGATAATT GGAGAGATAC AAGAAGGTTT GGAAATCTTG AATTGATACA GTAA
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| Protein sequence | MLKKRFSLLF LITFLLILSI TIGSEDLTLY FSFENGSEEG FLGTSERVKL SIVEDVVLDG
KYALKVHNRL SSWDGCRVSL TYNLLPEMNY LVSAFVYHTS DKPQPFQIVA RIKDIVGERF
ELIGETIAMP KVWKEIKGNF KFNYSVYLEA LDLMIVSPNE SGFDFYVDKI QVLGPNKVSS
PGSVVNSTFE SGTVENWEAR GDGVKILVRD NVAKTGKYSL FVTGRTRSWH GAQINLSKIL
ETGKSYDISV WVYQSSGETQ KITLTMQRKF DIDEKTRYET IVWQKSIPDK TWVELSGSYN
VPLNVKIEEL ILYVESPNTN LEFYVDDVKV TDRTLVLGQP EWEIPSLAEM FKGYFKIGVA
IPFKVLINPV EAKMVVKHFN SITSENEMKP ESLQPREGEF DFSKADAYVK FAEENGLVVR
GHTLVWHSQT PNWFFVDKDG KPASKELLLK RLENHIKTVV GRYKGRVYAW DVVNEAIDEA
QPDGFRRSKW FEILGPEYIE KAFIWAHEAD PNAKLFYNDY NTEIPAKREF IYKLVKSLKE
KGVPIHGVGL QCHINISWPE IEEIENTIKL FSTIPGIEIH ITELDMSVYT QAGEEYKTLP
RDVAVRQGYR YRKLFDMLKK YKNVVTNVTF WGLKDDYSWL NQRGRFNYPL LFDKDYQAKL
AYWALVSPNV LPPLIQSAKM ASGQAVVDGI EDKSYKSAIP VIINDGERDV AVVKPIWYMS
KIFVFAEVFD GRKDDTDCLT VFVDQNNAKS PYLQSDDVYF KFYRNGKIES NFAPMLKNYT
IREKETGYTI ECEIQIYAIP IGKGSKIGMD FSMIDGEKVV SWSDHSNQQL LSTIRYGTLE
LEEAVKLAQA KKGSPVVDAL MDDLYKSVDP IETETAVMGK IEKVKGKAWI LWDEDHIYLY
AEVSDDDLDD TATNPWEQDS FEIFIDENNA KTASYQADDA QYRVNFKNVQ TFGTGANAEY
INSATRLLRD GEKVIGYAVE VAIKMKTKRL KVGEVIGFDI QVNNASKGMR IGIYTWNDPV
GDNWRDTRRF GNLELIQ
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