Gene Dtur_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1713 
Symbol 
ID7082233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1729848 
End bp1730897 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content35% 
IMG OID643458823 
ProductUroporphyrinogen decarboxylase (URO-D) 
Protein accessionYP_002353599 
Protein GI217968093 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00218554 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA AAGAGTGGCA GATTTTGTTG GATTGTGTAA ATATGAAAGA ACCTGAGGAG 
ATTCCTATTG CTCTTATTGT GGATAGTCCT TGGATTCCTG GATATTTAGG AATTCCTCAC
ATGCAATTTT ATTTTATTCC TGATGTATGG CTTGAAGCCT ACAAAGAGAT CAAAAGGAGA
TTTCCTGAAG TTATTTTTAT TCCCGATTTC TGGGTCGAGT TTGGAATGGC TCAAGAACCT
TCTGCTTTTG GAGCTAAAAT TGTCTTTAAG CCTAATGCTA CTCCTAATAT AGAACCTATA
TTAAGTTCTG CTGACGATCT TCCTACTTTT ATTGCTAGGT TAAAAACTCC AAATCCTAAG
ACTGATGGAT TTATGCCTAT TGTTCTTGAG TACTATAAAT ATATTGAGCC TAAAGTAAAA
GGGATGGGAG AAAAGATAAA AATCGTTGCT GCAAGAGGTC CTCTTGCTAT TTCCTCTCAT
TTAATGGGAG TTACCGAGTT CTTAGTCTCG GTGAAGTTAT ATCCTGAGGA AGCAAAGAGA
CTTATTGAAA TTGCAACAAA TTTGGTAATT GATTTTCTTA CTGCTCAAAT AGAAGTCCTC
CATGATGTGG AAGGTATCCT TGTACTTGAT GATATTGTAG GCTTTTTCTC GGAGGAAGAT
TATCTTGAGT TTGCACATCC TTATCTTAAA AAGATATTTT CAAGCTTTGA TTATCCAGTA
AAGATTTATC ATAATGATAC TAATAACAAT GTTTATTACA AATATTTACC AGAACTTGGT
ATCAACATAT TTAACTTTAC TCATCTCCAA AATATAAAAG ATGTTTATAA TTTAACCCAA
GGAAAGATGT GCTTAATGGG AAATGTACCT CCCTTGGATG TTCTTGTTAA TGGGAGCAAA
GAGGATGTGA AAAGAGTTGT AGAAAAGATA CTAATGGATT ATGGAATGAA GAAGGGATTA
CTTCTTTCTG CTGGGGGTGG TGTATCTCCT GGAACCCCTG GCGAAAATAT AAGAGCTATG
ATTGACACAT CAAGAAGTTT TAAATTTTAG
 
Protein sequence
MKDKEWQILL DCVNMKEPEE IPIALIVDSP WIPGYLGIPH MQFYFIPDVW LEAYKEIKRR 
FPEVIFIPDF WVEFGMAQEP SAFGAKIVFK PNATPNIEPI LSSADDLPTF IARLKTPNPK
TDGFMPIVLE YYKYIEPKVK GMGEKIKIVA ARGPLAISSH LMGVTEFLVS VKLYPEEAKR
LIEIATNLVI DFLTAQIEVL HDVEGILVLD DIVGFFSEED YLEFAHPYLK KIFSSFDYPV
KIYHNDTNNN VYYKYLPELG INIFNFTHLQ NIKDVYNLTQ GKMCLMGNVP PLDVLVNGSK
EDVKRVVEKI LMDYGMKKGL LLSAGGGVSP GTPGENIRAM IDTSRSFKF