Gene Dtur_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1606 
Symbol 
ID7082124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1623591 
End bp1624757 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content35% 
IMG OID643458715 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_002353493 
Protein GI217967987 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.894963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTTG AAATTATTGT AAGAGATAAA AAAACGAGAG CAAGACTGGG AAAACTTAAG 
ACTTTTCATG GGGAGATTAA TACTCCTGTT TTTATGCCCG TAGGAACTCA GGGTGCAGTA
AAAACTCTTT CTCCAGAAGA AGTGGAGAAG GTCGGAGCAG AAATAATTCT CTCTAATACA
TACCATCTTT TTTTAAGACC AGGACATGAG ATTGTTAGAA AAGGTGGTGG ACTTCATAAG
TTTATGGGAT GGGAGAAACC AATTCTTACT GATAGTGGAG GATATCAAGT ATTTAGCTTG
GCAAGATTAA GAAGGATTGA CGAAGATGGG ATATATTTTA ATTCTCATAT TGATGGAACT
CGGTATTTTT ATACTCCTGA ACTTGTTATG GAGATACAAA AGTCTCTTGG TTCCGATATT
ATAATGCCCT TGGATATATG TCTTGGATAT GGAGCATCTT ACTGGGAAAC GAAAGAAGCC
CTTGAAATTA CTTTGAGGTG GCTTAAAAGG AGTATAGATT ACAAAAATAA TAGCAATATG
GATCATCAAC TTCTTTTTGG AATTGTGCAA GGGGGTTTTT ATAAAGAGTT AAGGAAAGAA
GCAGTAGAAA GAATGCTTAA TATAGATCTT CCGGGATTGG CTCTTGGTGG AATAAGTGTA
GGAGAACCTA AGGATAAAAT GTATGAGATA ATAGATTATA CAGTAAGTTT GCTTCCTGAG
GAGAAACCAA GATATCTTAT GGGAGTAGGA GCACCTGAAG ATTTAGTAGT GGGAGTTTCT
ATGGGAATAG ATATGTTTGA TTGTGTTTTA CCCACAAGGC TTGCAAGACA TGGGGTTTTT
TATACTTCAA AAGGAAGGAA AAATATAAAG AATGCACAAT ATAAAGAGGA CTTTTCACCT
CTTGAAGAAG ATTGTGATTG TTATACTTGT AGAAAGTTTA CCAAAGCCTA TATTAGGCAT
TTATTTTTAC AGCATGAAAC TTTTTCCTAT AGACTTTTAA CTATTCATAA CCTAAGATTC
CTTTTTAGAT TAATGGAAAA TATTAGGAAA AGCATTAGGG AAGGGAGGTT GGAAGAGTTT
AAGAAAGAAT TTTTAACTGA GTATCTAAGA GATGATCGAG AAAATAGATT GGAGAAGGAG
GAGCTATGGA GCAAGCTGTT AATTTAA
 
Protein sequence
MIFEIIVRDK KTRARLGKLK TFHGEINTPV FMPVGTQGAV KTLSPEEVEK VGAEIILSNT 
YHLFLRPGHE IVRKGGGLHK FMGWEKPILT DSGGYQVFSL ARLRRIDEDG IYFNSHIDGT
RYFYTPELVM EIQKSLGSDI IMPLDICLGY GASYWETKEA LEITLRWLKR SIDYKNNSNM
DHQLLFGIVQ GGFYKELRKE AVERMLNIDL PGLALGGISV GEPKDKMYEI IDYTVSLLPE
EKPRYLMGVG APEDLVVGVS MGIDMFDCVL PTRLARHGVF YTSKGRKNIK NAQYKEDFSP
LEEDCDCYTC RKFTKAYIRH LFLQHETFSY RLLTIHNLRF LFRLMENIRK SIREGRLEEF
KKEFLTEYLR DDRENRLEKE ELWSKLLI