Gene Dtur_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1565 
Symbol 
ID7082000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1579657 
End bp1580958 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content32% 
IMG OID643458674 
ProductABC-2 type transporter 
Protein accessionYP_002353453 
Protein GI217967947 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1668] ABC-type Na+ efflux pump, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000580039 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGT TTACAAACCT TCTTAAGAAA GAAATTAGGG AACTCGTTAC TTTGCAATTG 
ATAATTTCTC TTATTTTTAC AATTATCCTT TTTAATTTTC TGGGAAGTTT GACTAAAAGT
GAGATTAAAA AGTCGGTTCA ATTAAGAGAT GTATATGTAT TGGATTTGGA TAAAACTGAT
TTTTCTAAGG AGCTTTTGAA TAATTTATCT GTTGGCGGTT TTAGAGTTAA TCTTATAAAT
AAGGAAATTC AGAGAGAAGA TAAAAACCTT GCCATTGATT ATGCAAGGAT GAAAAACTTA
AATTTTCTTT TGATAATTCC AAGGGGCTTC GGAGATAAAG TTTCCAGTTT TCAATCTACA
GAGGTTGAAT TTTACTCCTT TATAAAGAGC TTTTCTATGG GAAGTACTGT GGGGAGTTCT
ATTGTTAATA ATATAATAAA TTCCATAAAT AATTATGTGT CTAATAATTT CTTAAAAGCC
AAATTTCCTA ACTTGAATCC TGAAAGTATT AAAAATCCTA TAAAAAGCAA AGAGTTTGTG
ATCATAAAGG ATAGAATTGC TGAGGCTTCT TCTTCTGAAG TTATGAATTT CGTCTACTCT
CAATCGGTTT TTATACCCAT TGTGCTTATG CTTGTCATAA CTTATGCTTC TCAAATGGTC
CTTTCGGCTA TTGCTCTTGA AAAGCAAGAT AAAACCCTTG AGACCCTACT TACAGTACCT
GTAAGTAGAA GGTATATTGT GGTGGCAAAG ATGGCTGGAG CTGGAATTGT GGGACTGATC
TCTGCAGGTG TATACATGTT GGGTTATAGA TCCTTTTTCT CTGGCATAAC AGGAGGAGTT
GATATAAATA AATTAAGTAG TGATATCATT ACCAAGCTTG GGATTTCCTT TACTCCTTAT
GGTTATCTCC TTCTTGGATT ATCTTTATTT TTAGCTATTC TTAACGCTTT AGCTTTATCT
ACGATTTTGG GGGTTTTATC GGAAGATTTG AGAAGTGCTC AGGGTTTTTC TTTTCCTATC
ATTATTCTTA TAATGATTCC CTATTTTCTT TCCCTTTTCA CCGATATAAA TTCCCTTTCT
TTACCTGTAA AGCTGTTGGT TTATGCTATT CCTTTTAGTC ATCCTTTTAT TGCTTCCTCA
AACATACTCC TTGGAAATTA TAACATAGTC TATTATGGGA TTCTTTACAT GCTTATAGTA
TTTATAATTC TGATTTTTAT TGCTGCAAGA ATTTTCTCTA CCGATCAAGT GATTACTATG
AAATTGAGAT TTGGAAAAAA AGCTAAGATT GGAGGGATTT AA
 
Protein sequence
MKKFTNLLKK EIRELVTLQL IISLIFTIIL FNFLGSLTKS EIKKSVQLRD VYVLDLDKTD 
FSKELLNNLS VGGFRVNLIN KEIQREDKNL AIDYARMKNL NFLLIIPRGF GDKVSSFQST
EVEFYSFIKS FSMGSTVGSS IVNNIINSIN NYVSNNFLKA KFPNLNPESI KNPIKSKEFV
IIKDRIAEAS SSEVMNFVYS QSVFIPIVLM LVITYASQMV LSAIALEKQD KTLETLLTVP
VSRRYIVVAK MAGAGIVGLI SAGVYMLGYR SFFSGITGGV DINKLSSDII TKLGISFTPY
GYLLLGLSLF LAILNALALS TILGVLSEDL RSAQGFSFPI IILIMIPYFL SLFTDINSLS
LPVKLLVYAI PFSHPFIASS NILLGNYNIV YYGILYMLIV FIILIFIAAR IFSTDQVITM
KLRFGKKAKI GGI