Gene Dtur_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1551 
Symbol 
ID7081986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand- 
Start bp1561815 
End bp1562918 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content35% 
IMG OID643458660 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_002353439 
Protein GI217967933 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.422589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTA TCACTCAGCA AGAAGATTTA TATAAGTCAT TGCAGTTTGT TAAGAGCGCT 
GTTGCTACAA AAACCACTAT ACCTATTCTA ACTTATGTCT ATATGAAGGC TGAGAATGAT 
ACTTTATATC TTCAAGGGAA TAATTTAGAA ATTGGACTTG CTTTAAGTAT GCCTGTTATT 
GTTGAAGAGC CAGGAGAAGT TTGTCTTCCG GCAAGTCTAT TTATAGATGT TATTGGAAAA 
CTTCCTGAAG TAACTTTAGA GATCCATGTG AATGAGAGAA ATAGAGCAGT AATCCATGCT 
GGATACTCGG ATATAGAGAT TCAAGGGGAA AGTACAGAAG AGTTTCCAAA AGTGGAAATT 
GGTAATATAG GTGAATATCA CGCAAGTTTT GATAGAATTC TGTTCGCAAA AGCTATAAAG 
CAGACTATTT TTGCTGCAGC CGAAGATGAA ATAAAACAAG TACTTACTGG GGTTCTTTTT 
GAAGGAAAAG AAGGAAAATT AAATATGGTA GCAGTGGATG GGCATAGGCT TGCTCTTAAG 
ACCTTGGAAA TAGAAAAAGA TTTTGCTCCT ATAATTGTTC CTTCTAAGAG CTTAAAGGAG 
TGGCAAAAAA TAATTACAAA AGCTATGGAT GATAGGGTAA ATATGGCTGC TTTAGATAAC 
CAAGTAGTAT TTAATTGTGG AGAGATTTAT TTTATATCAA GGCTTCTTCA GGGACAGTTT 
CCAGCTTATG ATAAGATAAT ACCAACGGAT TTTACAGCCT CTTTTAAAGC TAACAGGAAA 
GACTTTCTGG ATGTTTTAGG AAGAATGGAG GTCTTTGCCG AAATAGATCA AACAAATACG 
GTAAAAATTA GTCTTTCTTC AGAGGAGGTT GTAATTTCTA CTTTGCCATC GGAAAGAGGT 
TTTGCTAAGG AAGTATTGCC TGCTGAGGTT GAAATAGATG GTAATTTAGA GATAGGTTTC 
AATGTGGAAT ACCTTATGGA TCCTTTGGAC AATGCTGACT GGGATGAAGT AGTCATGAGA 
TTTACTTCTG ATCTTGGACC TGCTTTGATC ACATCTCCTG AAGATGAGAA TTATACATAT 
ATCTTAATGC CTGTAAGATT ATGA
 
Protein sequence
MKFITQQEDL YKSLQFVKSA VATKTTIPIL TYVYMKAEND TLYLQGNNLE IGLALSMPVI 
VEEPGEVCLP ASLFIDVIGK LPEVTLEIHV NERNRAVIHA GYSDIEIQGE STEEFPKVEI 
GNIGEYHASF DRILFAKAIK QTIFAAAEDE IKQVLTGVLF EGKEGKLNMV AVDGHRLALK 
TLEIEKDFAP IIVPSKSLKE WQKIITKAMD DRVNMAALDN QVVFNCGEIY FISRLLQGQF 
PAYDKIIPTD FTASFKANRK DFLDVLGRME VFAEIDQTNT VKISLSSEEV VISTLPSERG 
FAKEVLPAEV EIDGNLEIGF NVEYLMDPLD NADWDEVVMR FTSDLGPALI TSPEDENYTY 
ILMPVRL