Gene Dtur_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1056 
Symbol 
ID7081865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand+ 
Start bp1072841 
End bp1073908 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content32% 
IMG OID643458137 
Product3-dehydroquinate synthase 
Protein accessionYP_002352950 
Protein GI217967444 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.859657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAGT TAACTATTGA TTTGAAGGAT AAAAAATACC CCATATATAT TGGTTATAAC 
ATATTGAGAA GGCTTATAAA GGAATATTGG GATAAATATT CTTCATCTTT TCTTATAACT 
CATCCTTTTC TACGGGAGAT TTATAAGGAG GATTTATCTA TTCCTGAGGA AAATGTTATT 
TACGTTCCTG TAGGAGAAAA AAGTAAATCT TTTCAAGAGG TAATAAAAAT CTCCAAAGAG 
CTTGCGAAGA GAATGGCTGA TAGGAGAAGT GCTCTTTTTG CTTTTGGTGG TGGTGTTGTG 
GGAGATCTTA CTGGTTTTAT AGCCTCCATT TATATGAGAG GTATAAAATA TATTCAAATT 
CCTACAACTT TACTTTCTCA GGTGGATAGT TCCATAGGTG GAAAGACAGG AATAAACATA 
AGGGAAGGGA AAAACTTGAT AGGAACTTTT TATCATCCTG ATGCAGTAAT CATAGATATA 
AAGACTCTGG ATACTCTTTC TGAGAGAGAG TATAAAAGTG GCATCGCAGA AGTTATAAAG 
TATGGAATGA TCATGAATTA TGAATTCTTT AAGTTTCTTG AAAAGAACGT TGATTCTATA 
TTGAGCAAGG ATGTTGATAA ACTTCTGTAT GTTATAAAGG AAAGCCTTCT TTGTAAGAAG 
TATGTGGTTG AGAAAGATGA AAAAGAATCG TCTTTGAGAA TGATTTTAAA CTTTGGTCAT 
ACTTTTGGAC ATGCTATAGA GGCGAAAGGA GGATATAGGA GGTTTCTACA TGGTGAAGCT 
GTAGCAATTG GTATGCTTTT GGCTACTTAT TTAGGATATA AGCTTGGATT TTGCAATTAT 
GAGGTTTTAG AAAGATTAAA AGAATTACTA ATGCTTTTTG GATTTAAAAT TAAAAGTCCA 
TATAGAATTG AGGATTTAAT GGAGTATATA AAAAGGGACA AAAAAGCATA TGGAGGAAAA 
CTTAGACTTA TTCTACCAAG AGAAATAGGA AGGGTAGAGA TTGTAGAAGA TATAGAGGAA 
AAGGATATAA TAAAGATCTT AAAGGAAGGT GATGATTATG GAAAGTGA
 
Protein sequence
MEELTIDLKD KKYPIYIGYN ILRRLIKEYW DKYSSSFLIT HPFLREIYKE DLSIPEENVI 
YVPVGEKSKS FQEVIKISKE LAKRMADRRS ALFAFGGGVV GDLTGFIASI YMRGIKYIQI 
PTTLLSQVDS SIGGKTGINI REGKNLIGTF YHPDAVIIDI KTLDTLSERE YKSGIAEVIK 
YGMIMNYEFF KFLEKNVDSI LSKDVDKLLY VIKESLLCKK YVVEKDEKES SLRMILNFGH 
TFGHAIEAKG GYRRFLHGEA VAIGMLLATY LGYKLGFCNY EVLERLKELL MLFGFKIKSP 
YRIEDLMEYI KRDKKAYGGK LRLILPREIG RVEIVEDIEE KDIIKILKEG DDYGK