Gene Dtur_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0882 
Symbol 
ID7082837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp908109 
End bp910676 
Gene Length2568 bp 
Protein Length855 aa 
Translation table11 
GC content33% 
IMG OID643457958 
ProductDNA polymerase I 
Protein accessionYP_002352777 
Protein GI217967271 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains 
TIGRFAM ID[TIGR00593] DNA polymerase I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAA AAACCCTTTG GGATCTTTTC CAAGAAAATA CAGAAAGAGC CCTTAAGAAG 
ATTTTAGTTA TTGATGGTTC CAGCATCATA TATAGGGTTT ATTATGCCCT TCCCCCATTA
AAGACAAAAA ATGGGGAGCT GACCAATGCC CTTTATGGTT TTATAAGGAT ACTTTTAAAG
GCTGTAGAGG ATTTTAAACC TGATCTTTTA GGTATTGCCT TCGACAGACC TGAGCCAACC
TTTAGGCATG TTATCTATAA AGAATATAAA GCAAAAAGAC CACCAATGAA AGATGATTTG
AAAGCTCAAA TTCCTTGGAT AAGGGAATTT TTGAGGTTAA ATGATATACC TATATTGGAG
GAGCCTGGGT ATGAAGCTGA TGATATCATT GCTACTATAA TAAAAAGGTA TAAGGACGAT
TTAAAATATA TTCTTTCCGG AGATTTAGAT CTTTTACAAT TAGTCTCTGA TAAAACTTTT
TTAATACATC CTCAAAGAGG AATCACAGAG TTTACGATTT ATGATCCAAA GGCTGTTAAA
GAAAGATTTG GTGTAGAGCC TAAAAAAATT CCTCTTTATA AGGTCCTTGT GGGAGATGAG
TCGGATAATA TTCCTGGAAT AAACGGAATA GGACCTAAGA AAGCATCAAA AATTCTTGAA
AAGATCTCAA CTTTAGAAGA GTTTAAAGAT AAAGTGAGGT TCTTAGAGAG CGATTTAAGA
GAGATTATTG AGAAAAACTG GGATATTATT GAGAGAAATT TAGAGCTTGT TACATTAAAA
AATATAGATA AAGATTTTGT TCTTAAACCT TTTGAAATAA AAAAGGATGA AAAACTCATA
GAATTTTTGA AAAGATATGA ATTAAAAAGC ATTCTTCAAA AACTTTTTCC TGATCTTGAA
GAAAGGGAAA ATATAGAAAT TAAAGATGTA AAGGAAATCA ATTTTGAAGA GGCAAAAAAG
GAAGGTTGTT TTGCTTTTAA ATGCCTTGGA GAAAAAGGCT TTGAAGGAAT ATCCATCTCC
TTTAAGGAAG GAGAAGGATA TTTTATAGCT TCCTTTGACT TTAATGATGA AGTTAAAGGG
AAAGTTAAAG ATATTATTTC TTTCGAAAAT ATTAAAAAGA TTGGAGCTTA TATACAGAGG
GATCTACATT TTCTGGACTG TAAAATAAAA GGGGAGGTGT TTGATGTTAG TCTCGCATCC
TATCTTTTAA ATCCAGAAAG ACAAAATCAT TCCCTTGACA TACTTATAAG AGAGTATTTA
AATAGGACCT CTTTTATTCC TCAAAAGTAT GCTGCTTATC TCTTTCCTTT AAAAACTATT
CTAGAAGAAA GGATAAAAAA GGAAGAATTG GAATTTGTGC TTTTTAATAT AGAAACACCG
CTTATTCCTG TACTTTACTC CATGGAAAAA TGGGGAATAA AGGTAGATAA GGAGTATTTA
AAAAGTCTCT CTGATGAATT TTGTGAGAGA ATTAAGAAAT TGGAAGAGGA AATATATGAA
CTTGCAGGTA TGAAGTTTAA TCTTAATTCT CCAAAACAAC TTTCTGAGGT TTTATTTGAG
AGATTGAAGC TTCCTTCTGG CAAGAAAGGA AAAACAGGAT ATTCTACATC ATCTTTGGTG
CTTCAAAATT TACTGAATGC TCATCCTATT GTGATAAAAA TCCTCCAATA TAGGGAGTTA
TATAAACTTA AAAGCACCTA TATAGATGCT ATTCCTAATC TTATAAATTC ACAAACAGGC
AGGGTTCATA CTAAATTTAA CCCCACAGGT ACAGCCACAG GAAGGATAAG TAGTAGTGAA
CCCAATCTAC AAAATATTCC CATAAAAAGC GAGGAAGGAA GAAAGATAAG GAGAGCCTTT
ATAGCAGATG ATGGATATTA TTTTGTATCT CTTGATTATT CCCAAATAGA GCTTAGAATT
ATGGCTCACC TCTCTCAAGA ACCTAAATTA ATATCAGCCT TCCAAAAGGG TGAAGATATT
CATAGAAGAA CAGCAGCAGA AATTTTCGGA GTGCCTGAAG ATGAAGTAGA TGATCTTTTG
AGGTCGAGGG CAAAGGCGGT TAACTTTGGA ATTATTTATG GCATCTCTTC CTTTGGGCTT
TCTGAAACTG CAAGTATCAC TCCGGAAGAG GCTGAAAAAT TTATAGATTC ATATTTTAAA
CATTATCCAA GGGTAAAGCT CTTTATAGAT AAAACTATTT ATGAGGCAAG AGAAAAGTTA
TATGTAAAGA CTTTATTTGG AAGAAAAAGA TATATACCTG AAATTAGAAG TATAAATAAG
CAGGTGAGGA ATGCTTATGA AAGGATAGCT ATAAATGCGC CTATTCAAGG AACAGCGGCG
GATATAATAA AACTTGCCAT GATAGAGATT TATAAAGAAA TAGAGGAAAA AAATCTTAAG
TCAAGAATAC TTTTACAGAT TCACGATGAA CTTATTCTTG AAGTGCCTGA AGAAGAAATG
GAGTTTACCC CTTTGATGGC AAAGGAAAAG ATGGAAAAGG TTGTAGAACT TTCTGTTCCT
CTTGTGGTTG AGATTTCAGT GGGTAAAAAT CTGGCTGAGC TGAAATGA
 
Protein sequence
MEQKTLWDLF QENTERALKK ILVIDGSSII YRVYYALPPL KTKNGELTNA LYGFIRILLK 
AVEDFKPDLL GIAFDRPEPT FRHVIYKEYK AKRPPMKDDL KAQIPWIREF LRLNDIPILE
EPGYEADDII ATIIKRYKDD LKYILSGDLD LLQLVSDKTF LIHPQRGITE FTIYDPKAVK
ERFGVEPKKI PLYKVLVGDE SDNIPGINGI GPKKASKILE KISTLEEFKD KVRFLESDLR
EIIEKNWDII ERNLELVTLK NIDKDFVLKP FEIKKDEKLI EFLKRYELKS ILQKLFPDLE
ERENIEIKDV KEINFEEAKK EGCFAFKCLG EKGFEGISIS FKEGEGYFIA SFDFNDEVKG
KVKDIISFEN IKKIGAYIQR DLHFLDCKIK GEVFDVSLAS YLLNPERQNH SLDILIREYL
NRTSFIPQKY AAYLFPLKTI LEERIKKEEL EFVLFNIETP LIPVLYSMEK WGIKVDKEYL
KSLSDEFCER IKKLEEEIYE LAGMKFNLNS PKQLSEVLFE RLKLPSGKKG KTGYSTSSLV
LQNLLNAHPI VIKILQYREL YKLKSTYIDA IPNLINSQTG RVHTKFNPTG TATGRISSSE
PNLQNIPIKS EEGRKIRRAF IADDGYYFVS LDYSQIELRI MAHLSQEPKL ISAFQKGEDI
HRRTAAEIFG VPEDEVDDLL RSRAKAVNFG IIYGISSFGL SETASITPEE AEKFIDSYFK
HYPRVKLFID KTIYEAREKL YVKTLFGRKR YIPEIRSINK QVRNAYERIA INAPIQGTAA
DIIKLAMIEI YKEIEEKNLK SRILLQIHDE LILEVPEEEM EFTPLMAKEK MEKVVELSVP
LVVEISVGKN LAELK