Gene Dtur_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0836 
Symbol 
ID7082789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp857922 
End bp859262 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content31% 
IMG OID643457910 
Productouter membrane efflux protein 
Protein accessionYP_002352731 
Protein GI217967225 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAGA AAACCGTATT TTATCTTCTG CTAATTCTTA TTTTTATTGT GACTCTTAGC 
TTTTCTGAGG ACTATTTAAC TCTTGAAAGC CTTAAACCTT TGTTAATAAA ATCTCCTCTT
TATAAAATTT ACCAGGTGCA ATATAATAAC GCTTTACAAG AATATAATCT TGCCTATTCT
AACTTAAAAC CTCAACTCTC TTTACAGTTT TCTTATAATC AAGGTGAGAC GAGTGTGACC
TTAAATAATG TCACCTCTAT GAGCGAGACA AAATCAGGGA ATCTATCTCT TAGTTTTTCC
CAAGTTCTTT TCCTAAAGGG ACAGGCAGGT ATAAGTATAA AATTAGCTGA GCTAAATTTG
GAACAAGAGA AGAATAATTT TAAAACTAAC TGTCAAAATC TATACTACCA ATTTATACAA
AGCTTTTACA ATTTATATCT TGCCCAAGAA CAGTTAAAAA TTTACGAAGA AAGTTATAAT
CTTAGCAAAA AGCAAGAAGA GGTAGCGGAA AAGCAATTTA AAGACGGTGT AATAAATGAA
ATTACTCTTT TAGACTATAA GCAGAAAGCA AAGCTTGCAG AGATAAATTA CAATTCTGCA
AAAAATAACT TGGAGTTAAG TTATAAATCT CTTGAAAATT TGTTGGGAAC CACTCTCCCC
AGAGTACCTG TAAAACTTGA TGTAAATTAT GAACCCATTA CGTATTCTGC TGATGAATTA
ATATCAAGGC TGTATTCAAA TAATTTAACT ATTAAAAATT CAACCCTTGA TCTTGAGAAG
GCGAAAGTAA ATTTGGAGAA GGCAAATCTC CCGTCTTGGA ATATTGGTAT AAGTGGAAGT
TATAGTTCGG GGAATATTAC TTATGCTTTG TCCTTTGATA CTCAAAATTA TGCTCTTAAT
GCTTCGGTAA GTCCAAGCTG GAGTACTTCT CAAAAAAGTA CTGAAAATAT ATGGAACTTT
AAAATATCCT TCAGCACTCC TATTTTAGAT GGTGGAAGTA AAAACATTAC TAAATCTCAA
GCTCAAATCT CTTTAGATCA AGCCCAAATA AATTATGAAA AAACTAAAAA AGATGTGGAA
CTCAATTTTT GGAAAACCTA TTATAATCTC TTGACAGCTC AAGAAACTAT AGAGCAAAAG
AAACTTCTTT TAGAACAAAA GAAGACCAAT TTAGAGGCTC AGAAAATAAG ATATAACCTT
GGTTTGATTA CAGATCTTGA TCTTAAAAAT TATGAGATTG ACTATATGCA GGCTCAGTAT
GATCTTAAAA ATGCAATTTT AAATTTTAAT CTTCAAAAAA TTCAGTTAGA TATTCTTTTA
GGAAACTGGG AGGTAAATTA A
 
Protein sequence
MYKKTVFYLL LILIFIVTLS FSEDYLTLES LKPLLIKSPL YKIYQVQYNN ALQEYNLAYS 
NLKPQLSLQF SYNQGETSVT LNNVTSMSET KSGNLSLSFS QVLFLKGQAG ISIKLAELNL
EQEKNNFKTN CQNLYYQFIQ SFYNLYLAQE QLKIYEESYN LSKKQEEVAE KQFKDGVINE
ITLLDYKQKA KLAEINYNSA KNNLELSYKS LENLLGTTLP RVPVKLDVNY EPITYSADEL
ISRLYSNNLT IKNSTLDLEK AKVNLEKANL PSWNIGISGS YSSGNITYAL SFDTQNYALN
ASVSPSWSTS QKSTENIWNF KISFSTPILD GGSKNITKSQ AQISLDQAQI NYEKTKKDVE
LNFWKTYYNL LTAQETIEQK KLLLEQKKTN LEAQKIRYNL GLITDLDLKN YEIDYMQAQY
DLKNAILNFN LQKIQLDILL GNWEVN