Gene Dtur_0521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0521 
Symbol 
ID7083183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp525419 
End bp526231 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content35% 
IMG OID643457602 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002352428 
Protein GI217966922 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA TGGGTTTATC AAAAGCACTT TTTTGGTTTA CTATAATAGT ATATTCTTTT 
AATATTCTTG GGATTATACT TACTGTAGTC TTAAACTCTT TAAGTAAAGA GTGGTATGGA
GAATTATTTC CCAAAATATT TACCTTTGAA TGGTACGCCT ATATGGCAAG AGAACATGAT
CTTCCTCAAC TTCTTTACGC CACTTTCATA GTAGCGATCT CAGTGGCTTT AATAGCTCTA
ATAATTGGAC TTCCTACAGC CTATGTTTTA GCAAGATATG ATTTTAGACT CAAAAATGTA
ATCTTATCCT TTTTATTACT TCCTATGTTG ATTCCTCCAA TGACCTATGG CATCCCTCTT
GCTGCACTAC TTTATAAATT GAGACTTGCA ACAAAACTCT CTGGGGTTAT ACTTGCAAAC
CTTGTGCCGG TAGTCCCCTA TGTAACTCTA ATTTTGACGC CTTTTATTGA ACAGATAGAT
ATTAGTTATG AGTCTGCAGC AAGAATTTTA GGAGCTAATA GGTTTCAGAC ATTTTTTAAA
GTACTTCTTC CTTTAATAAT ACCAGGAATT TTTACTTCTG CTCTTTTGTC TATTGTAAGA
ACAATTGCTA TGTTTGAGTT AACCTTTTTA GTAGCAGGCC CCAAGTCTCA AACGGTAGTA
GTAGCCCTTT ATTACGATGC TTATGCTGCT GGAACTCGTC CGCCCCAAGC TATTGATGCT
CTTGCAGTGG TATATTTCTT GATTACTATG ACCTTTCTTG TGATTGCTTT AAGGTTTGCA
AGTCCTACTC AGTTTGTTTA TAGAGGAAAA TAG
 
Protein sequence
MKRMGLSKAL FWFTIIVYSF NILGIILTVV LNSLSKEWYG ELFPKIFTFE WYAYMAREHD 
LPQLLYATFI VAISVALIAL IIGLPTAYVL ARYDFRLKNV ILSFLLLPML IPPMTYGIPL
AALLYKLRLA TKLSGVILAN LVPVVPYVTL ILTPFIEQID ISYESAARIL GANRFQTFFK
VLLPLIIPGI FTSALLSIVR TIAMFELTFL VAGPKSQTVV VALYYDAYAA GTRPPQAIDA
LAVVYFLITM TFLVIALRFA SPTQFVYRGK