Gene Dtur_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0062 
Symbol 
ID7082329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp61577 
End bp62359 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content39% 
IMG OID643457187 
ProductABC-2 type transporter 
Protein accessionYP_002352014 
Protein GI217966508 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR01247] daunorubicin resistance ABC transporter membrane protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000566487 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACGT TGATGTATGA CACTTATTCA GTAATGTGGA GAGAACTAAA ACATTGGATG 
GATCAAAAAG TAAGAATATT GGTATCTATA TTTCAGCCCC TAATTTGGCT TGCCCTCATG
GGAAACGTAA TGGCAAAACT TACAGACAAC CCTTTTGGAA GACAGGCTTT TGGAGGTGCC
AGTTATCTCT CCTTTATGAC CCCTGGAATC ATAGTTATGA CCTCCCTTTT TGGGGGCATT
TTTGGTGGAA TCTCTGTAGT ATGGGATAGA AGATGGGGAT ATTTAAATAA AATGCTCGCA
GCACCTATTT CAAGAACAGC TATTCCTCTT GGGAAAATGC TTGCTACTGC CATCCAGGGA
GCTTTTCAAT CTCTTATTGT AGTCATAATT GCATCTCTTT TTGGAGTAGA ATTTGCAACA
GGAATTCCAG GAATCATTGC CATAATTCTT CTTGCTGCAT GCTTTAACTT TACCATGGCA
GGACTTTCCA TTGCTATAGC ATCAAGGATA AAAACCATGG AAGTTTTAAC AGCTGTAATA
AACTTTCTTA CAATGCCTTT AATGTTCACA AGTAGTGCCA TGTTCCCAAT AAACGTGATG
CCCGATTGGC TTGCCACCAT TGCAAGATGG AATCCTATAA CCTACGTGGT AAATCCATTA
AGAACTCTTG TGATAAGTGG TTGGGAGACA GGAGACCTAA TAAAAGGATT TCTTTATGTA
CTTTTCCTCG CCATATTAAT GCTTTTCATC GCAAGACATG AGTTCAAAAG AAGTATTGCA
TAA
 
Protein sequence
MRTLMYDTYS VMWRELKHWM DQKVRILVSI FQPLIWLALM GNVMAKLTDN PFGRQAFGGA 
SYLSFMTPGI IVMTSLFGGI FGGISVVWDR RWGYLNKMLA APISRTAIPL GKMLATAIQG
AFQSLIVVII ASLFGVEFAT GIPGIIAIIL LAACFNFTMA GLSIAIASRI KTMEVLTAVI
NFLTMPLMFT SSAMFPINVM PDWLATIARW NPITYVVNPL RTLVISGWET GDLIKGFLYV
LFLAILMLFI ARHEFKRSIA