| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_6414 |
|---|
| Symbol | |
|---|
| ID | 6983485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011371 |
|---|
| Strand | + |
|---|
| Start bp | 71848 |
|---|
| End bp | 73356 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643399411 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_002284167 |
|---|
| Protein GI | 209552252 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0705751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTGC GCATGATCCC ACCCAGCGGC CAGACTTATA CTCAAATCCT CAAGTCGACG
ATGCTGATGG GCGGTTCCTC GCTGGTCAAT GTCGCCCTGA GCATCATTCG CAACAAGGCG
CTCGCCCTTC TGCTCGGTCC TGAAGGAGTC GGGCTTCTCG GCCTTTACGG GGCAATCCTC
GATATCGCGC AGGCGATAGC CGGTCTTGGT GTGAGCAGCA GCGGTGTGCG CCGGGTCGCC
GAGGCGGCGG GCGCCGGCGA CGGAGAGAAG ATCGCGCGGT CGGCGGCAGT GCTCAGACGC
ATCTCGCTGG TGCTCGGGTT GCTCGGCGGG CTTTTGCTGG CGATGCTGGC GTTTCCGGTC
TCGAAATTCA CCTTCGGCGA TTACCAGCAC GCCGGCGGCG TTGTGTTGCT CTCCCTGGCC
GTCTTCTGTC GGATTGTAGC TGCCGGGCAA GCTGCGTTGA TCCAGGGCTT GCGGGGCATT
GCAAATCTTG CCCGCATCAA TGTGCTTTCA GGGCTCTTCG GCACGATCGT CAGCATCCCG
CTAATCTATC TGTTCGGCGA GCAGGCGATC GTACCCTCTC TCGTGGCGAT CGCGGCCGTC
TCGGTCCTTC CCACCTGGTG GTACAGCAAA CAAATATCCA GGCACCCACC GCCAATGTCG
GCGCGCCAAT TCGGCCAGGA AGCGAAATCC CTGTTCAGAC TCGGCGTCGC TTTCATGGCC
AGCGGGCTTC TGACCTTCGG CGCGGCCTAT GCCATCCGCA TCATCGTGCT GAATGAAGGG
GGCGTCGTCG CGGCGGGATT GTATCAGGCA GCCTGGGCGC TTGGCGGTCT CTATGCCGGC
TTCATCCTGC AGGCGATGGG AACGGACTTC TATCCGCGCT TGACCGCAAT CGCGCACGAT
AATGCTGAGT GCAACCGGCT GGTCAATGAG CAGGCGGAAA TCAGCTTGTT GCTGGCCGGC
CCTGGACTGC TCGCCACCCT GACCCTGGCA CCGCTCGTGA TGAGCTTGTT CTATTCGGCG
GAGTTTCACG GGGCCGTGGA GCTTCTGCGC TGGATCTGCC TTGGAATGAT GCTCAGGATC
GTCGCCTGGC CGATGGGTTT CATCGTCCTG GCGAAGGGTG CGCAGACGAT CTTCTTTTGG
ACCGAGGTCG CAGCAACGCT GGTGCATGTG GGGCTGGCGT GGCTCTTCGT AGCAGAATTC
GGCACGACAG GGGCCGGCAT GGCGTTCTTC GGCCTCTACG TCTGGCATAG CATTCTGATT
TACGTGATCG TGCGTCGGCT CACCGGCTTT CGCTGGTCGC CTGCCAATCG CAGGCACGCG
CTTCTCTTCC TGCCTGTATC GGGATTGGTC GTCTCGGCCT TTCTGTTCTT ATCGCCATGG
TCGGCGACGG TAGTTGGCTG TGTCGCCGTT ATTCTCTGCG GGCTCTATTC GCTGCGCATG
CTGATCGACC TGCTTCCGCC GGAATCCGTG CCGGCAACCA TCCGCGAATG GATCACGAAA
TCGGCATAA
|
|---|
| Protein sequence | MTVRMIPPSG QTYTQILKST MLMGGSSLVN VALSIIRNKA LALLLGPEGV GLLGLYGAIL
DIAQAIAGLG VSSSGVRRVA EAAGAGDGEK IARSAAVLRR ISLVLGLLGG LLLAMLAFPV
SKFTFGDYQH AGGVVLLSLA VFCRIVAAGQ AALIQGLRGI ANLARINVLS GLFGTIVSIP
LIYLFGEQAI VPSLVAIAAV SVLPTWWYSK QISRHPPPMS ARQFGQEAKS LFRLGVAFMA
SGLLTFGAAY AIRIIVLNEG GVVAAGLYQA AWALGGLYAG FILQAMGTDF YPRLTAIAHD
NAECNRLVNE QAEISLLLAG PGLLATLTLA PLVMSLFYSA EFHGAVELLR WICLGMMLRI
VAWPMGFIVL AKGAQTIFFW TEVAATLVHV GLAWLFVAEF GTTGAGMAFF GLYVWHSILI
YVIVRRLTGF RWSPANRRHA LLFLPVSGLV VSAFLFLSPW SATVVGCVAV ILCGLYSLRM
LIDLLPPESV PATIREWITK SA
|
|---|
| |