| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_6320 |
|---|
| Symbol | |
|---|
| ID | 6983393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011370 |
|---|
| Strand | - |
|---|
| Start bp | 270606 |
|---|
| End bp | 271850 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643399323 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002284079 |
|---|
| Protein GI | 209552163 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCCA TCACGGAACT TACAACGGCA GATGGCCGCC CGCTTCGGAC TGCTTTGGCA
GACGCTCGAA TCAGGGCGAA GCGAAGAGCG CTGTTACTCG TCTTGCCGCT TTTACTGTTC
ATCGTAATCA CATTCGTCGT GCCGATCGGG CAGGTCCTGT ACAGATCGTT TTACAATGAC
GAATTTGCCG CGAGCGCCCC GCAGCTAAAG GCATGGTTCG AGGCAACAGC GGAAGGCACA
GCCCCAGACG AGGCTGCTTA CGGCGCACTC GCCGCGGATC TTGACCGGAT GCGACGCGAG
CGGACCGCTG GTGCCGCAGG CACGAGAATA AACGATGTCC TTCCCGGCTC GAGATCGCTG
TTCACTGCGG CTGCCAGAGG CGCTGTCGAG TTGAAGCCAC CATATCGAGA AGCGCTCGTT
GAAAAAGACG CTCGCTGGGA AGATCCGCGT CTCTGGAACG CCATGCGCGC AGCTGTAAAT
CCGAAAACGG CGGACTACTT CATCATCGCC CTGGATCGAC AGCGGAGCGT TGACGGCGGC
TGGGAGCGGG CTCCGGAGGA GCGCCGGCTG TATGTATCTC TGTTCATTAA GACCCTCTGG
CAGTCCGGCC TGGTTACTTT ACTCTGCCTA GTCCTGGCAT TCCCGGTCGC TCACCTCATC
GCGAACCTGC GCCCGTCGAT CGCGAACCTG CTTCTTATGC TCGTGTTGCT ACCGTTCTGG
ACCTCGTTGC TCGTCCGAAC ATCAAGCTGG ATCGTACTGC TTCAGGGGCA GGGTGTCGTG
AACAACATCC TCGTCGCTAT CGACCTGGTC AAAACTGATC GAAGGCTCGA GTTGATCTAC
AACAACGTCG GAACCATCAT CGTCATGGTG CACGTGTCGC TTCCCTTGAT GATTCTTCCC
CTGTATTCGG TGATGCGGAT GATAAATCCT GCCTATGTGC GGGCGGCCCG CAGCCTCGGA
GCCACGAGCT GGACGGCTTT CAGGCGCGTC TACCTGCCTT TGACGATGCC GGGTGTCGCC
GCTGGGTGTC TGCTCGTCTA CATTCTCGCA GTCGGTTATT ACATCACACC AGCGCTCGTC
GGCGGAGCGG ACGGGCAGTT CATTTCGAAC ATGATCCAAT ACCATCTTGG GGCATCGAAC
TGGTCTCTTG CCGCCGCCTT GGCGCTTATC CTCCTCGTCG GTGTCTTGAT CCTATACTGG
CTCTATGACC GCCTGGTTGG GATCGAGAAA CTCAAGCTCG GCTGA
|
|---|
| Protein sequence | MVAITELTTA DGRPLRTALA DARIRAKRRA LLLVLPLLLF IVITFVVPIG QVLYRSFYND
EFAASAPQLK AWFEATAEGT APDEAAYGAL AADLDRMRRE RTAGAAGTRI NDVLPGSRSL
FTAAARGAVE LKPPYREALV EKDARWEDPR LWNAMRAAVN PKTADYFIIA LDRQRSVDGG
WERAPEERRL YVSLFIKTLW QSGLVTLLCL VLAFPVAHLI ANLRPSIANL LLMLVLLPFW
TSLLVRTSSW IVLLQGQGVV NNILVAIDLV KTDRRLELIY NNVGTIIVMV HVSLPLMILP
LYSVMRMINP AYVRAARSLG ATSWTAFRRV YLPLTMPGVA AGCLLVYILA VGYYITPALV
GGADGQFISN MIQYHLGASN WSLAAALALI LLVGVLILYW LYDRLVGIEK LKLG
|
|---|
| |