Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_6286 |
Symbol | |
ID | 6983359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011370 |
Strand | - |
Start bp | 236881 |
End bp | 237714 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643399292 |
Product | polysaccharide deacetylase |
Protein accession | YP_002284048 |
Protein GI | 209552132 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.14057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGG TTTGCCTCAC ATTTGACTTC GACGCGGTAT CGCTTTGGAT CGGCACGATG AAGCAGACAA CTGCAACCCC GCTGTCGCGT GGAGAATTTG GCGCTTTGGT CGGGTTGCCG AGAGTGCTCG ACCTTCTTGT CGAGAAGGAT GTCTCCGCGA CTTTTTTTGT CCCAGCGCAC AGTGCCGGCG CATTTCCTGA CGCGGCGAAA GGCATAAGAG ATCAAGGGCA TGAAATTGGC TTACATGGCT ATTGCCATGA AACTCCGATC GGATTGACGC GCGAGCAGGA GGCGGACCTC CTTGATCGGT CGATAGAAAA AATGCGGTTC ATTCTTGGAA ACGACTACTT GCCCAAGGGG TATCGCTCCC CGGCGTGGGA CCTGAGTGCT GACTCGATCG AGCTGCTGGA GGAGCGCGGT TTATTGTACG ATTCCAGTTT AATGGGTGAC GATTATCGCC CCTATCGCGC TCACAAACGG TACACGGCGG ACGAAACCCA CTACCACCGC GGCGAGGCCA GCCGAGTTGT GGAAATCCCC GTTGCCTGGG AACTCGACGA TTTTCCGCAT TTTGTTTTCC TCAACAAACC GATGTATTTG GGCATGCGGA CTCCAACCGA GGTTTTCGAG CTCTGGAAGG AAGAGTTCGA TTTCTGCCAT TCGCTCGGCA ACGGCGTCTT CACGCTCACA ATGCACCCCC AAGTTATAGG TCGCGGTCCA AGGATCGCAA TGCTGTCGCG CTTGATAGAT TATATGCGGT CACAGCCCGA AGTCCAGTTC GTGACAATGG GCGAAGTCGC CGTCGACCAA TCGAATCGGC TTGAGGTGAA GTAA
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Protein sequence | MTTVCLTFDF DAVSLWIGTM KQTTATPLSR GEFGALVGLP RVLDLLVEKD VSATFFVPAH SAGAFPDAAK GIRDQGHEIG LHGYCHETPI GLTREQEADL LDRSIEKMRF ILGNDYLPKG YRSPAWDLSA DSIELLEERG LLYDSSLMGD DYRPYRAHKR YTADETHYHR GEASRVVEIP VAWELDDFPH FVFLNKPMYL GMRTPTEVFE LWKEEFDFCH SLGNGVFTLT MHPQVIGRGP RIAMLSRLID YMRSQPEVQF VTMGEVAVDQ SNRLEVK
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