Gene Rleg2_6286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6286 
Symbol 
ID6983359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011370 
Strand
Start bp236881 
End bp237714 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content55% 
IMG OID643399292 
Productpolysaccharide deacetylase 
Protein accessionYP_002284048 
Protein GI209552132 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.14057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGG TTTGCCTCAC ATTTGACTTC GACGCGGTAT CGCTTTGGAT CGGCACGATG 
AAGCAGACAA CTGCAACCCC GCTGTCGCGT GGAGAATTTG GCGCTTTGGT CGGGTTGCCG
AGAGTGCTCG ACCTTCTTGT CGAGAAGGAT GTCTCCGCGA CTTTTTTTGT CCCAGCGCAC
AGTGCCGGCG CATTTCCTGA CGCGGCGAAA GGCATAAGAG ATCAAGGGCA TGAAATTGGC
TTACATGGCT ATTGCCATGA AACTCCGATC GGATTGACGC GCGAGCAGGA GGCGGACCTC
CTTGATCGGT CGATAGAAAA AATGCGGTTC ATTCTTGGAA ACGACTACTT GCCCAAGGGG
TATCGCTCCC CGGCGTGGGA CCTGAGTGCT GACTCGATCG AGCTGCTGGA GGAGCGCGGT
TTATTGTACG ATTCCAGTTT AATGGGTGAC GATTATCGCC CCTATCGCGC TCACAAACGG
TACACGGCGG ACGAAACCCA CTACCACCGC GGCGAGGCCA GCCGAGTTGT GGAAATCCCC
GTTGCCTGGG AACTCGACGA TTTTCCGCAT TTTGTTTTCC TCAACAAACC GATGTATTTG
GGCATGCGGA CTCCAACCGA GGTTTTCGAG CTCTGGAAGG AAGAGTTCGA TTTCTGCCAT
TCGCTCGGCA ACGGCGTCTT CACGCTCACA ATGCACCCCC AAGTTATAGG TCGCGGTCCA
AGGATCGCAA TGCTGTCGCG CTTGATAGAT TATATGCGGT CACAGCCCGA AGTCCAGTTC
GTGACAATGG GCGAAGTCGC CGTCGACCAA TCGAATCGGC TTGAGGTGAA GTAA
 
Protein sequence
MTTVCLTFDF DAVSLWIGTM KQTTATPLSR GEFGALVGLP RVLDLLVEKD VSATFFVPAH 
SAGAFPDAAK GIRDQGHEIG LHGYCHETPI GLTREQEADL LDRSIEKMRF ILGNDYLPKG
YRSPAWDLSA DSIELLEERG LLYDSSLMGD DYRPYRAHKR YTADETHYHR GEASRVVEIP
VAWELDDFPH FVFLNKPMYL GMRTPTEVFE LWKEEFDFCH SLGNGVFTLT MHPQVIGRGP
RIAMLSRLID YMRSQPEVQF VTMGEVAVDQ SNRLEVK