Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_6211 |
Symbol | |
ID | 6983284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011370 |
Strand | + |
Start bp | 153610 |
End bp | 154344 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643399223 |
Product | VirB8 family protein |
Protein accession | YP_002283979 |
Protein GI | 209552063 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0724347 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCATTGT TCAGAAAGCA ATTAAAGCCT GCGCCGACCG ATCAGATTGC CGGCCCGCAG CACATCTACG ATCAGCATCT CTCCTGGGGA GAAAAGAACC GCTCGCTCAG AACCTTGATT GGTCTCATCC TGTTGGCCTT CGCCGTTGCC GGCTGGGTCG TCGCCGGCGT GCTTTCTTTT TCGGTGGCGC AGCTTTTCCC GCTTGTCCGC ACCGAGGTCG TTCCTCTCAT CGTCGACAAG AACACGGGAT ACATGGAAAC CGTGACGACG CTCGACAAGG ATCGGTCGAG CGTCGCGGAA ATGCAGGCTG TTCGGGCCTC CTTCGTCGGC AATTATGTCA TCCGGCGAGA GACCTACGAT CCCCGATATC TGTCGGATAA TTTCGACATG ATCGCGCTGT GGTCGGAGCC GAACTCTGAA GCTTTCAAAG ACTACGAGGC GTGGATGAAC CCGTCCAACC CACGAGGGCC TGTGAAAACC ATGGGCGCGA CCGGTGACAT CCGTCCGGAG ATCCTCTCGG TCAATCCACT CAATGCCTCG ACCATGGCCG TCCGCTTCGA GACACGGGAG CGCCAACGTG GTGGTGACGT CGTCAATCGG TGGTCTGCAA CGGTACGCTT TCGCCAGATC AATCTGCCAG CCAGCAACCG GGTTCGGCTT TACAATCCGC TCGGCTATGT TGTTACCGAA TATGTGAAGG TCCCAGAGAC AATGCCTTCG GGGCTCGCTC CATGA
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Protein sequence | MALFRKQLKP APTDQIAGPQ HIYDQHLSWG EKNRSLRTLI GLILLAFAVA GWVVAGVLSF SVAQLFPLVR TEVVPLIVDK NTGYMETVTT LDKDRSSVAE MQAVRASFVG NYVIRRETYD PRYLSDNFDM IALWSEPNSE AFKDYEAWMN PSNPRGPVKT MGATGDIRPE ILSVNPLNAS TMAVRFETRE RQRGGDVVNR WSATVRFRQI NLPASNRVRL YNPLGYVVTE YVKVPETMPS GLAP
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