| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_6211 |
|---|
| Symbol | |
|---|
| ID | 6983284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011370 |
|---|
| Strand | + |
|---|
| Start bp | 153610 |
|---|
| End bp | 154344 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643399223 |
|---|
| Product | VirB8 family protein |
|---|
| Protein accession | YP_002283979 |
|---|
| Protein GI | 209552063 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0724347 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCATTGT TCAGAAAGCA ATTAAAGCCT GCGCCGACCG ATCAGATTGC CGGCCCGCAG
CACATCTACG ATCAGCATCT CTCCTGGGGA GAAAAGAACC GCTCGCTCAG AACCTTGATT
GGTCTCATCC TGTTGGCCTT CGCCGTTGCC GGCTGGGTCG TCGCCGGCGT GCTTTCTTTT
TCGGTGGCGC AGCTTTTCCC GCTTGTCCGC ACCGAGGTCG TTCCTCTCAT CGTCGACAAG
AACACGGGAT ACATGGAAAC CGTGACGACG CTCGACAAGG ATCGGTCGAG CGTCGCGGAA
ATGCAGGCTG TTCGGGCCTC CTTCGTCGGC AATTATGTCA TCCGGCGAGA GACCTACGAT
CCCCGATATC TGTCGGATAA TTTCGACATG ATCGCGCTGT GGTCGGAGCC GAACTCTGAA
GCTTTCAAAG ACTACGAGGC GTGGATGAAC CCGTCCAACC CACGAGGGCC TGTGAAAACC
ATGGGCGCGA CCGGTGACAT CCGTCCGGAG ATCCTCTCGG TCAATCCACT CAATGCCTCG
ACCATGGCCG TCCGCTTCGA GACACGGGAG CGCCAACGTG GTGGTGACGT CGTCAATCGG
TGGTCTGCAA CGGTACGCTT TCGCCAGATC AATCTGCCAG CCAGCAACCG GGTTCGGCTT
TACAATCCGC TCGGCTATGT TGTTACCGAA TATGTGAAGG TCCCAGAGAC AATGCCTTCG
GGGCTCGCTC CATGA
|
|---|
| Protein sequence | MALFRKQLKP APTDQIAGPQ HIYDQHLSWG EKNRSLRTLI GLILLAFAVA GWVVAGVLSF
SVAQLFPLVR TEVVPLIVDK NTGYMETVTT LDKDRSSVAE MQAVRASFVG NYVIRRETYD
PRYLSDNFDM IALWSEPNSE AFKDYEAWMN PSNPRGPVKT MGATGDIRPE ILSVNPLNAS
TMAVRFETRE RQRGGDVVNR WSATVRFRQI NLPASNRVRL YNPLGYVVTE YVKVPETMPS
GLAP
|
|---|
| |