| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_6203 |
|---|
| Symbol | |
|---|
| ID | 6983276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011370 |
|---|
| Strand | + |
|---|
| Start bp | 145911 |
|---|
| End bp | 147065 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643399215 |
|---|
| Product | Lytic transglycosylase catalytic |
|---|
| Protein accession | YP_002283971 |
|---|
| Protein GI | 209552055 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0827287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0199903 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGG ATCGCAGCCC GCTTTCTCTC CTCCAGAGAC CGCAAACCGA CTGGTCGCGG
CACGTATTTT GGCCTGCACT GACATCTGTT CTTCTCCTGA CCTCGTTCAC CGCCAGTACC
GGGAAGGGTG GTCAGTTTAT CGCAGCCGCG CCACCGCCTC AGCGGGGTGA CCGGCTGCGC
TCTGTTGACA ACTTCAGATC AGGCTTCGCG CCAACCCAGC CGAATTTGGC TGCCGTGGGC
GCGACGACCA CGGAGAGCGC AACCTCGTCG CCGGCAATCG ATTGGAGCAA TTTCTCACAG
CGAATCGGTG AACCCGACAC TGCCGATAAG ATGACCGCCA GCCTGTCTCC ACTGGGGACA
AATGTGGTCG ACACGATGGA AAGCAGGCTT GACGCGCGAG GCACGGCCTC GAGCGGAGGT
GCCGGAGCCA AACTCGGCGT TTATTCGTCG ATCGGCGTTT TTTCCGCTGA TGATCAGCCG
GTGAGCGCGG CCGTCAACCA GGCAGGCGAG CCTCGTAAGA GCAGCGCGAC GGCCGGAGCG
CGACCTAGCC TCATCGCCCA AATGCCCCAG GAGTATACCG CGCTCGCCAT AAAGATCGCC
GTCGAAGAGG GCGTCGATCC GAACTGGGTG CTGTCAATCA TGCACGCCGA GAATGGCGAT
TTCGATCCCG AACTGGTCAG TGCCGCTGGC GCCATCGGCC TTATGCAGGT CATGCCGAAG
ATCGGGAAGG CTTTCGGCGC TGCCGATCTT ACGGATCCTG AGCAGAATAT CCGCGCTGGC
ACCCGCTTCC TGCGTGTCCT CATCGACAAA TATCGCAATC CGGTTCTCGT CGCCTCCGCC
TATAATGCCG GCGAACCCCG CGTCGACGCG CGTCATTCCT TGCCGCTGAT TCAGGAGACG
GCCGACTATG TGACGCGGGT CGTTGGCTAC TACACGGGTG CATCGTCATC TTCATCAGCT
TCAAGCACTG CCAACGCAAC TCCGTCCGCC CCGGCCCCTG GCCGTCCTAC AGGTCGCGCT
GATCGGGCTA GATCCCCAAT GCTTGTTTTT TCCATTCCAG GCACGCCCGT GGCGGCAAGC
CGCAGCCAAG AGGAGGCCGC TGAAATCCCT TTCGGCGGCC CGATAAAAAT CGTCAAGGAA
GAGGTGAACC CATGA
|
|---|
| Protein sequence | MAMDRSPLSL LQRPQTDWSR HVFWPALTSV LLLTSFTAST GKGGQFIAAA PPPQRGDRLR
SVDNFRSGFA PTQPNLAAVG ATTTESATSS PAIDWSNFSQ RIGEPDTADK MTASLSPLGT
NVVDTMESRL DARGTASSGG AGAKLGVYSS IGVFSADDQP VSAAVNQAGE PRKSSATAGA
RPSLIAQMPQ EYTALAIKIA VEEGVDPNWV LSIMHAENGD FDPELVSAAG AIGLMQVMPK
IGKAFGAADL TDPEQNIRAG TRFLRVLIDK YRNPVLVASA YNAGEPRVDA RHSLPLIQET
ADYVTRVVGY YTGASSSSSA SSTANATPSA PAPGRPTGRA DRARSPMLVF SIPGTPVAAS
RSQEEAAEIP FGGPIKIVKE EVNP
|
|---|
| |